Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00336Q6ZUF6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LINC00336Q6ZUF6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00336Q6ZUF6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00336Q6ZUF6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00336Q6ZUF6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00336Q6ZUF6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 MMP23A-201ENST00000234610 1017 ntBASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 AL390719.1-204ENST00000412397 1219 ntBASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 AC092865.7-201ENST00000641832 219 ntBASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 PKD1P6-201ENST00000343738 4769 ntBASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 CYP21A1P-202ENST00000354927 1481 ntBASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00336Q6ZUF6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 AL355355.2-201ENST00000442321 338 ntBASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 C2orf69P4-201ENST00000565394 541 ntBASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00336Q6ZUF6 LINC00565-201ENST00000562710 2331 ntBASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 RN7SL850P-201ENST00000579959 291 ntBASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 AC026471.5-201ENST00000615068 467 ntBASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00336Q6ZUF6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms