Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDHR3Q6ZTQ4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 TCF3P1-201ENST00000423021 1937 ntBASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDHR3Q6ZTQ4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDHR3Q6ZTQ4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 AC090192.1-201ENST00000517740 490 ntBASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDHR3Q6ZTQ4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.39■□□□□ 0.86
CDHR3Q6ZTQ4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CDHR3Q6ZTQ4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 AC092720.2-201ENST00000602388 1665 ntBASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms