Protein–RNA interactions for Protein: Q6UXD1

HRCT1, Histidine-rich carboxyl terminus protein 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRCT1Q6UXD1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 MIR3181-201ENST00000578512 73 ntBASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 RASSF1-AS1-201ENST00000629828 790 ntBASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HRCT1Q6UXD1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.65□□□□□ -0.39
HRCT1Q6UXD1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HRCT1Q6UXD1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.65□□□□□ -0.39
HRCT1Q6UXD1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HRCT1Q6UXD1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
HRCT1Q6UXD1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 AC079089.2-201ENST00000531211 1277 ntBASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 MIR3621-201ENST00000580529 85 ntBASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 AC087239.1-201ENST00000622671 572 ntBASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
HRCT1Q6UXD1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 AC026471.6-201ENST00000622954 1905 ntBASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 AL356441.2-201ENST00000443009 864 ntBASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 AC092171.4-201ENST00000609130 632 ntBASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 AC012313.1-201ENST00000593393 3059 ntBASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HRCT1Q6UXD1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 AC244015.2-201ENST00000616358 1861 ntBASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 SYT6-210ENST00000641643 1587 ntBASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HRCT1Q6UXD1 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms