Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
REEP3Q6NUK4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
REEP3Q6NUK4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
REEP3Q6NUK4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 AC091799.1-201ENST00000422823 811 ntBASIC18.96■□□□□ 0.63
REEP3Q6NUK4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 KRT18P14-201ENST00000534205 1250 ntBASIC18.96■□□□□ 0.63
REEP3Q6NUK4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 RBM17P2-201ENST00000616397 1405 ntBASIC18.96■□□□□ 0.63
REEP3Q6NUK4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.96■□□□□ 0.63
REEP3Q6NUK4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.96■□□□□ 0.62
REEP3Q6NUK4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 AC004854.2-201ENST00000608450 1441 ntBASIC18.95■□□□□ 0.62
REEP3Q6NUK4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 AC007322.3-201ENST00000426526 701 ntBASIC18.95■□□□□ 0.62
REEP3Q6NUK4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
REEP3Q6NUK4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 TCF3P1-201ENST00000423021 1937 ntBASIC18.94■□□□□ 0.62
REEP3Q6NUK4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 SMG8-203ENST00000578922 2178 ntBASIC18.94■□□□□ 0.62
REEP3Q6NUK4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
REEP3Q6NUK4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
REEP3Q6NUK4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 KRT8P36-201ENST00000489121 1440 ntBASIC18.92■□□□□ 0.62
REEP3Q6NUK4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
REEP3Q6NUK4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms