Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 AC016405.3-201ENST00000607710 860 ntBASIC23.59■■□□□ 1.37
KRT40Q6A162 AL121832.2-201ENST00000610979 668 ntBASIC23.59■■□□□ 1.37
KRT40Q6A162 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT40Q6A162 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
KRT40Q6A162 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT40Q6A162 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT40Q6A162 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.58■■□□□ 1.37
KRT40Q6A162 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.58■■□□□ 1.37
KRT40Q6A162 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KRT40Q6A162 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
KRT40Q6A162 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.58■■□□□ 1.37
KRT40Q6A162 AC008687.6-201ENST00000596318 630 ntBASIC23.58■■□□□ 1.37
KRT40Q6A162 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
KRT40Q6A162 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
KRT40Q6A162 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KRT40Q6A162 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
KRT40Q6A162 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
KRT40Q6A162 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT40Q6A162 FAM21FP-204ENST00000608637 956 ntBASIC23.57■■□□□ 1.36
KRT40Q6A162 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
KRT40Q6A162 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KRT40Q6A162 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
KRT40Q6A162 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT40Q6A162 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT40Q6A162 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.56■■□□□ 1.36
KRT40Q6A162 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT40Q6A162 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT40Q6A162 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.56■■□□□ 1.36
KRT40Q6A162 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.56■■□□□ 1.36
KRT40Q6A162 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT40Q6A162 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.56■■□□□ 1.36
KRT40Q6A162 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT40Q6A162 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT40Q6A162 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT40Q6A162 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT40Q6A162 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT40Q6A162 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.55■■□□□ 1.36
KRT40Q6A162 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT40Q6A162 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT40Q6A162 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.55■■□□□ 1.36
KRT40Q6A162 AL162412.1-201ENST00000567129 965 ntBASIC23.55■■□□□ 1.36
KRT40Q6A162 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.55■■□□□ 1.36
KRT40Q6A162 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.55■■□□□ 1.36
KRT40Q6A162 AC068338.2-201ENST00000563278 1430 ntBASIC23.55■■□□□ 1.36
KRT40Q6A162 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KRT40Q6A162 AL512408.1-201ENST00000569378 2000 ntBASIC23.55■■□□□ 1.36
KRT40Q6A162 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.55■■□□□ 1.36
KRT40Q6A162 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT40Q6A162 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.55■■□□□ 1.36
KRT40Q6A162 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT40Q6A162 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
KRT40Q6A162 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT40Q6A162 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 AC092720.2-201ENST00000602388 1665 ntBASIC23.54■■□□□ 1.36
KRT40Q6A162 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
KRT40Q6A162 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 FAM201B-201ENST00000458407 597 ntBASIC23.54■■□□□ 1.36
KRT40Q6A162 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT40Q6A162 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
KRT40Q6A162 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
KRT40Q6A162 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT40Q6A162 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT40Q6A162 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT40Q6A162 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
KRT40Q6A162 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT40Q6A162 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms