Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 HTR7P1-201ENST00000538670 1336 ntBASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 TMPOP1-202ENST00000424642 1267 ntBASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 AF186192.3-201ENST00000583427 947 ntBASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 AL353708.3-201ENST00000610272 989 ntBASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 AL121829.2-201ENST00000620908 328 ntBASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD4Q5XG99 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 AL353807.1-201ENST00000427475 662 ntBASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD4Q5XG99 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 MMP23A-201ENST00000234610 1017 ntBASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 KRT16P5-201ENST00000455284 522 ntBASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.08■□□□□ 0.81
LYSMD4Q5XG99 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LYSMD4Q5XG99 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD4Q5XG99 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD4Q5XG99 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD4Q5XG99 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD4Q5XG99 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD4Q5XG99 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 RN7SL850P-201ENST00000579959 291 ntBASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 AL445228.2-201ENST00000605589 952 ntBASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
LYSMD4Q5XG99 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 NBPF21P-201ENST00000425093 1451 ntBASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 C9orf163-202ENST00000624034 2573 ntBASIC20.05■□□□□ 0.8
LYSMD4Q5XG99 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms