Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.25■■□□□ 1.31
COL13A1Q5TAT6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AC007322.3-201ENST00000426526 701 ntBASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AL160237.2-201ENST00000556165 472 ntBASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AL136038.3-201ENST00000561909 1096 ntBASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 AL139424.1-201ENST00000607572 797 ntBASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 NPAP1P7-201ENST00000613027 823 ntBASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL13A1Q5TAT6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 EMBP1-201ENST00000458200 901 ntBASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL13A1Q5TAT6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 AC092865.5-201ENST00000545435 363 ntBASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL13A1Q5TAT6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 NIFKP9-201ENST00000419265 221 ntBASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL13A1Q5TAT6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL13A1Q5TAT6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 PMS2P1-201ENST00000431037 1228 ntBASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL13A1Q5TAT6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms