Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 ABHD17AP1-201ENST00000358206 933 ntBASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
TTC39AQ5SRH9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC39AQ5SRH9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 AC060766.5-201ENST00000590539 871 ntBASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 HLA-B-256ENST00000639848 1089 ntBASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.8■■□□□ 1.56
TTC39AQ5SRH9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 FP700111.2-201ENST00000619190 1892 ntBASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC39AQ5SRH9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 AL137060.1-201ENST00000618151 2648 ntBASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.78■■□□□ 1.56
TTC39AQ5SRH9 AL121603.2-201ENST00000557373 2117 ntBASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 AC092368.3-202ENST00000574180 1591 ntBASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
TTC39AQ5SRH9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 UNC93B5-201ENST00000530315 699 ntBASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 PNMA6B-201ENST00000538162 1200 ntBASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TTC39AQ5SRH9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms