Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB6CQ53S08 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ53S08 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
RAB6CQ53S08 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB6CQ53S08 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB6CQ53S08 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB6CQ53S08 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.24■□□□□ 0.99
RAB6CQ53S08 AC090192.1-201ENST00000517740 490 ntBASIC21.24■□□□□ 0.99
RAB6CQ53S08 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB6CQ53S08 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB6CQ53S08 LINC01521-201ENST00000504184 1943 ntBASIC21.23■□□□□ 0.99
RAB6CQ53S08 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.23■□□□□ 0.99
RAB6CQ53S08 AC087633.2-202ENST00000565166 1439 ntBASIC21.23■□□□□ 0.99
RAB6CQ53S08 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB6CQ53S08 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB6CQ53S08 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB6CQ53S08 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 KRT17P1-201ENST00000399211 1546 ntBASIC21.23■□□□□ 0.99
RAB6CQ53S08 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB6CQ53S08 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB6CQ53S08 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB6CQ53S08 AC105036.2-201ENST00000569468 176 ntBASIC21.22■□□□□ 0.99
RAB6CQ53S08 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB6CQ53S08 AC069236.1-201ENST00000604339 616 ntBASIC21.22■□□□□ 0.99
RAB6CQ53S08 OR10C1-204ENST00000622521 1039 ntBASIC21.22■□□□□ 0.99
RAB6CQ53S08 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RAB6CQ53S08 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB6CQ53S08 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB6CQ53S08 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB6CQ53S08 PCDHAC2-203ENST00000615316 3011 ntBASIC21.21■□□□□ 0.99
RAB6CQ53S08 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB6CQ53S08 AC133552.2-202ENST00000575694 574 ntBASIC21.21■□□□□ 0.99
RAB6CQ53S08 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB6CQ53S08 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.21■□□□□ 0.99
RAB6CQ53S08 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB6CQ53S08 SMG8-203ENST00000578922 2178 ntBASIC21.21■□□□□ 0.99
RAB6CQ53S08 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB6CQ53S08 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB6CQ53S08 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB6CQ53S08 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RAB6CQ53S08 AC112907.3-201ENST00000577781 2400 ntBASIC21.2■□□□□ 0.99
RAB6CQ53S08 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 GUSBP6-202ENST00000438529 1198 ntBASIC21.2■□□□□ 0.98
RAB6CQ53S08 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 CYP2T3P-201ENST00000601990 817 ntBASIC21.2■□□□□ 0.98
RAB6CQ53S08 AL356652.1-201ENST00000615962 565 ntBASIC21.2■□□□□ 0.98
RAB6CQ53S08 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB6CQ53S08 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB6CQ53S08 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB6CQ53S08 AC092720.2-201ENST00000602388 1665 ntBASIC21.19■□□□□ 0.98
RAB6CQ53S08 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB6CQ53S08 MCRIP2P1-201ENST00000394346 511 ntBASIC21.19■□□□□ 0.98
RAB6CQ53S08 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.19■□□□□ 0.98
RAB6CQ53S08 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB6CQ53S08 AC006970.2-201ENST00000450065 779 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms