Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 YLR159C-AYLR159C-A 132 nt2.83□□□□□ -1.96
CTK1Q03957 YOR072W-AYOR072W-A 249 nt2.83□□□□□ -1.96
CTK1Q03957 ECM21YBL101C 3354 nt2.82□□□□□ -1.96
CTK1Q03957 Q0032Q0032 291 nt2.82□□□□□ -1.96
CTK1Q03957 CYC7YEL039C 342 nt2.82□□□□□ -1.96
CTK1Q03957 YIL066W-AYIL066W-A 444 nt2.82□□□□□ -1.96
CTK1Q03957 AYR1YIL124W 894 nt2.82□□□□□ -1.96
CTK1Q03957 RAM2YKL019W 951 nt2.82□□□□□ -1.96
CTK1Q03957 YNL337WYNL337W 255 nt2.82□□□□□ -1.96
CTK1Q03957 snR51snR51 107 nt2.82□□□□□ -1.96
CTK1Q03957 AIM9YER080W 1884 nt2.82□□□□□ -1.96
CTK1Q03957 PUF4YGL014W 2667 nt2.81□□□□□ -1.96
CTK1Q03957 REV1YOR346W 2958 nt2.81□□□□□ -1.96
CTK1Q03957 tM(CAU)Q1tM(CAU)Q1 76 nt2.81□□□□□ -1.96
CTK1Q03957 YGR174W-AYGR174W-A 87 nt2.81□□□□□ -1.96
CTK1Q03957 COX14YML129C 213 nt2.81□□□□□ -1.96
CTK1Q03957 OSH6YKR003W 1347 nt2.81□□□□□ -1.96
CTK1Q03957 RRM3YHR031C 2172 nt2.81□□□□□ -1.96
CTK1Q03957 RIX1YHR197W 2292 nt2.8□□□□□ -1.96
CTK1Q03957 MSB2YGR014W 3921 nt2.8□□□□□ -1.96
CTK1Q03957 YGL239CYGL239C 315 nt2.8□□□□□ -1.96
CTK1Q03957 RPL32YBL092W 393 nt2.8□□□□□ -1.96
CTK1Q03957 ITC1YGL133W 3795 nt2.8□□□□□ -1.96
CTK1Q03957 TRM2YKR056W 1920 nt2.8□□□□□ -1.96
CTK1Q03957 DBP10YDL031W 2988 nt2.79□□□□□ -1.96
CTK1Q03957 snR80snR80 171 nt2.79□□□□□ -1.96
CTK1Q03957 DYN2YDR424C 279 nt2.79□□□□□ -1.96
CTK1Q03957 YBR121C-AYBR121C-A 159 nt2.79□□□□□ -1.96
CTK1Q03957 VAS1YGR094W 3315 nt2.78□□□□□ -1.96
CTK1Q03957 DYN1YKR054C 12279 nt2.78□□□□□ -1.96
CTK1Q03957 YGL149WYGL149W 306 nt2.78□□□□□ -1.96
CTK1Q03957 LSO2YGR169C-A 279 nt2.78□□□□□ -1.96
CTK1Q03957 YHL005CYHL005C 393 nt2.78□□□□□ -1.96
CTK1Q03957 HSK3YKL138C-A 210 nt2.78□□□□□ -1.96
CTK1Q03957 YKR033CYKR033C 426 nt2.78□□□□□ -1.96
CTK1Q03957 SMA2YML066C 1110 nt2.78□□□□□ -1.96
CTK1Q03957 ILS1YBL076C 3219 nt2.78□□□□□ -1.97
CTK1Q03957 YJL070CYJL070C 2667 nt2.77□□□□□ -1.97
CTK1Q03957 HTL1YCR020W-B 237 nt2.77□□□□□ -1.97
CTK1Q03957 QCR7YDR529C 384 nt2.77□□□□□ -1.97
CTK1Q03957 YER189WYER189W 369 nt2.77□□□□□ -1.97
CTK1Q03957 TIM13YGR181W 318 nt2.77□□□□□ -1.97
CTK1Q03957 PAC1YOR269W 1485 nt2.77□□□□□ -1.97
CTK1Q03957 FUN30YAL019W 3396 nt2.77□□□□□ -1.97
CTK1Q03957 UBP14YBR058C 2346 nt2.76□□□□□ -1.97
CTK1Q03957 PUF6YDR496C 1971 nt2.76□□□□□ -1.97
CTK1Q03957 PMR1YGL167C 2853 nt2.76□□□□□ -1.97
CTK1Q03957 BPT1YLL015W 4680 nt2.76□□□□□ -1.97
CTK1Q03957 SAK1YER129W 3429 nt2.76□□□□□ -1.97
CTK1Q03957 TAF2YCR042C 4224 nt2.76□□□□□ -1.97
CTK1Q03957 IPT1YDR072C 1584 nt2.76□□□□□ -1.97
CTK1Q03957 GCD6YDR211W 2139 nt2.76□□□□□ -1.97
CTK1Q03957 YGR265WYGR265W 411 nt2.76□□□□□ -1.97
CTK1Q03957 YIL169CYIL169C 2988 nt2.76□□□□□ -1.97
CTK1Q03957 RGM1YMR182C 636 nt2.76□□□□□ -1.97
CTK1Q03957 YPR099CYPR099C 357 nt2.76□□□□□ -1.97
CTK1Q03957 ROM1YGR070W 3468 nt2.76□□□□□ -1.97
CTK1Q03957 GIN4YDR507C 3429 nt2.75□□□□□ -1.97
CTK1Q03957 YLR278CYLR278C 4026 nt2.75□□□□□ -1.97
CTK1Q03957 DIS3YOL021C 3006 nt2.74□□□□□ -1.97
CTK1Q03957 YGL188C-AYGL188C-A 141 nt2.74□□□□□ -1.97
CTK1Q03957 LSM7YNL147W 348 nt2.74□□□□□ -1.97
CTK1Q03957 RPL36BYPL249C-A 303 nt2.74□□□□□ -1.97
CTK1Q03957 YBR197CYBR197C 654 nt2.74□□□□□ -1.97
CTK1Q03957 DSE4YNR067C 3354 nt2.74□□□□□ -1.97
CTK1Q03957 KAR3YPR141C 2190 nt2.74□□□□□ -1.97
CTK1Q03957 FLO1YAR050W 4614 nt2.73□□□□□ -1.97
CTK1Q03957 RPA190YOR341W 4995 nt2.73□□□□□ -1.97
CTK1Q03957 PSK2YOL045W 3306 nt2.73□□□□□ -1.97
CTK1Q03957 RLI1YDR091C 1827 nt2.73□□□□□ -1.97
CTK1Q03957 YDR344CYDR344C 444 nt2.73□□□□□ -1.97
CTK1Q03957 YER079C-AYER079C-A 339 nt2.73□□□□□ -1.97
CTK1Q03957 ALG13YGL047W 609 nt2.73□□□□□ -1.97
CTK1Q03957 YGR069WYGR069W 336 nt2.73□□□□□ -1.97
CTK1Q03957 BLI1YKL061W 342 nt2.73□□□□□ -1.97
CTK1Q03957 RPL6AYML073C 531 nt2.73□□□□□ -1.97
CTK1Q03957 SOK1YDR006C 2706 nt2.73□□□□□ -1.97
CTK1Q03957 ORC1YML065W 2745 nt2.73□□□□□ -1.97
CTK1Q03957 ATG13YPR185W 2217 nt2.73□□□□□ -1.97
CTK1Q03957 MPH1YIR002C 2982 nt2.73□□□□□ -1.97
CTK1Q03957 KAP104YBR017C 2757 nt2.72□□□□□ -1.97
CTK1Q03957 PSY2YNL201C 2577 nt2.72□□□□□ -1.97
CTK1Q03957 LYS9YNR050C 1341 nt2.72□□□□□ -1.97
CTK1Q03957 ERP6YGL002W 651 nt2.72□□□□□ -1.97
CTK1Q03957 HTB2YBL002W 396 nt2.72□□□□□ -1.97
CTK1Q03957 RTC6YPL183W-A 282 nt2.72□□□□□ -1.97
CTK1Q03957 MF(ALPHA)1YPL187W 498 nt2.72□□□□□ -1.97
CTK1Q03957 TSC11YER093C 4293 nt2.72□□□□□ -1.97
CTK1Q03957 KEL2YGR238C 2649 nt2.72□□□□□ -1.97
CTK1Q03957 TFC4YGR047C 3078 nt2.71□□□□□ -1.98
CTK1Q03957 MOT1YPL082C 5604 nt2.71□□□□□ -1.98
CTK1Q03957 CDC20YGL116W 1833 nt2.71□□□□□ -1.98
CTK1Q03957 YDR048CYDR048C 315 nt2.71□□□□□ -1.98
CTK1Q03957 RPS12YOR369C 432 nt2.71□□□□□ -1.98
CTK1Q03957 RGR1YLR071C 3249 nt2.7□□□□□ -1.98
CTK1Q03957 DUF1YOL087C 3351 nt2.7□□□□□ -1.98
CTK1Q03957 YDL062WYDL062W 426 nt2.7□□□□□ -1.98
CTK1Q03957 snR76snR76 109 nt2.7□□□□□ -1.98
CTK1Q03957 YGL024WYGL024W 336 nt2.7□□□□□ -1.98
CTK1Q03957 GRX8YLR364W 330 nt2.7□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms