Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SKP1P63208 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SKP1P63208 AC073210.2-201ENST00000430369 194 ntBASIC19.34■□□□□ 0.69
SKP1P63208 GUSBP6-202ENST00000438529 1198 ntBASIC19.34■□□□□ 0.69
SKP1P63208 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.34■□□□□ 0.69
SKP1P63208 AL138781.1-201ENST00000566567 1274 ntBASIC19.34■□□□□ 0.69
SKP1P63208 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.34■□□□□ 0.69
SKP1P63208 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.34■□□□□ 0.69
SKP1P63208 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.34■□□□□ 0.69
SKP1P63208 AC133041.1-202ENST00000642053 222 ntBASIC19.34■□□□□ 0.69
SKP1P63208 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.34■□□□□ 0.69
SKP1P63208 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.34■□□□□ 0.69
SKP1P63208 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SKP1P63208 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SKP1P63208 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.33■□□□□ 0.69
SKP1P63208 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SKP1P63208 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.33■□□□□ 0.69
SKP1P63208 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SKP1P63208 AL355802.2-201ENST00000402069 882 ntBASIC19.33■□□□□ 0.68
SKP1P63208 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.33■□□□□ 0.68
SKP1P63208 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.33■□□□□ 0.68
SKP1P63208 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.33■□□□□ 0.68
SKP1P63208 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SKP1P63208 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SKP1P63208 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SKP1P63208 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.68
SKP1P63208 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SKP1P63208 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SKP1P63208 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.32■□□□□ 0.68
SKP1P63208 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.32■□□□□ 0.68
SKP1P63208 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SKP1P63208 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SKP1P63208 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 AC005229.4-201ENST00000610085 2198 ntBASIC19.32■□□□□ 0.68
SKP1P63208 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SKP1P63208 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SKP1P63208 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SKP1P63208 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.32■□□□□ 0.68
SKP1P63208 AC142086.2-201ENST00000569753 217 ntBASIC19.32■□□□□ 0.68
SKP1P63208 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.32■□□□□ 0.68
SKP1P63208 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.32■□□□□ 0.68
SKP1P63208 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SKP1P63208 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SKP1P63208 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SKP1P63208 AC007375.3-201ENST00000600936 2314 ntBASIC19.31■□□□□ 0.68
SKP1P63208 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SKP1P63208 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SKP1P63208 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SKP1P63208 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.31■□□□□ 0.68
SKP1P63208 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SKP1P63208 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.31■□□□□ 0.68
SKP1P63208 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SKP1P63208 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.31■□□□□ 0.68
SKP1P63208 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SKP1P63208 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.31■□□□□ 0.68
SKP1P63208 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.31■□□□□ 0.68
SKP1P63208 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SKP1P63208 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SKP1P63208 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SKP1P63208 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
SKP1P63208 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SKP1P63208 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.3■□□□□ 0.68
SKP1P63208 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SKP1P63208 AL355472.2-201ENST00000422958 438 ntBASIC19.3■□□□□ 0.68
SKP1P63208 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.3■□□□□ 0.68
SKP1P63208 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.3■□□□□ 0.68
SKP1P63208 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.3■□□□□ 0.68
SKP1P63208 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SKP1P63208 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
SKP1P63208 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SKP1P63208 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SKP1P63208 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SKP1P63208 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms