Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3P56703 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3P56703 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3P56703 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.28■□□□□ 0.68
WNT3P56703 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
WNT3P56703 TCF3P1-201ENST00000423021 1937 ntBASIC19.28■□□□□ 0.68
WNT3P56703 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.28■□□□□ 0.68
WNT3P56703 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.28■□□□□ 0.68
WNT3P56703 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.28■□□□□ 0.68
WNT3P56703 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
WNT3P56703 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
WNT3P56703 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3P56703 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3P56703 SMG8-203ENST00000578922 2178 ntBASIC19.27■□□□□ 0.68
WNT3P56703 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3P56703 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.27■□□□□ 0.68
WNT3P56703 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.27■□□□□ 0.68
WNT3P56703 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.27■□□□□ 0.68
WNT3P56703 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.27■□□□□ 0.68
WNT3P56703 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.27■□□□□ 0.68
WNT3P56703 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3P56703 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3P56703 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
WNT3P56703 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3P56703 KRT8P36-201ENST00000489121 1440 ntBASIC19.26■□□□□ 0.67
WNT3P56703 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3P56703 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3P56703 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
WNT3P56703 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
WNT3P56703 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3P56703 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3P56703 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3P56703 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3P56703 AC007322.3-201ENST00000426526 701 ntBASIC19.26■□□□□ 0.67
WNT3P56703 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3P56703 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.26■□□□□ 0.67
WNT3P56703 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3P56703 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.26■□□□□ 0.67
WNT3P56703 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
WNT3P56703 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3P56703 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3P56703 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3P56703 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
WNT3P56703 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
WNT3P56703 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
WNT3P56703 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.25■□□□□ 0.67
WNT3P56703 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3P56703 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.25■□□□□ 0.67
WNT3P56703 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 AC006015.1-201ENST00000429970 570 ntBASIC19.25■□□□□ 0.67
WNT3P56703 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3P56703 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.25■□□□□ 0.67
WNT3P56703 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.25■□□□□ 0.67
WNT3P56703 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3P56703 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3P56703 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
WNT3P56703 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3P56703 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
WNT3P56703 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3P56703 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3P56703 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3P56703 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3P56703 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3P56703 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3P56703 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3P56703 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
WNT3P56703 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3P56703 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.24■□□□□ 0.67
WNT3P56703 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
WNT3P56703 AC080038.1-201ENST00000611274 1154 ntBASIC19.24■□□□□ 0.67
WNT3P56703 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3P56703 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3P56703 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
WNT3P56703 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
WNT3P56703 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.23■□□□□ 0.67
WNT3P56703 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms