Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.96■■□□□ 1.11
PDE6CP51160 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.96■■□□□ 1.11
PDE6CP51160 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.96■■□□□ 1.11
PDE6CP51160 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.96■■□□□ 1.11
PDE6CP51160 AC008694.1-202ENST00000636953 945 ntBASIC21.96■■□□□ 1.11
PDE6CP51160 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.96■■□□□ 1.11
PDE6CP51160 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.96■■□□□ 1.11
PDE6CP51160 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 GABARAPL3-202ENST00000624044 1851 ntBASIC21.96■■□□□ 1.11
PDE6CP51160 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDE6CP51160 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
PDE6CP51160 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.95■■□□□ 1.1
PDE6CP51160 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6CP51160 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDE6CP51160 AC091799.1-201ENST00000422823 811 ntBASIC21.95■■□□□ 1.1
PDE6CP51160 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6CP51160 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDE6CP51160 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6CP51160 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.95■■□□□ 1.1
PDE6CP51160 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDE6CP51160 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6CP51160 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6CP51160 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6CP51160 AC092667.1-201ENST00000434301 2586 ntBASIC21.94■■□□□ 1.1
PDE6CP51160 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.94■■□□□ 1.1
PDE6CP51160 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.94■■□□□ 1.1
PDE6CP51160 AC027702.1-201ENST00000563810 1770 ntBASIC21.94■■□□□ 1.1
PDE6CP51160 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.94■■□□□ 1.1
PDE6CP51160 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.94■■□□□ 1.1
PDE6CP51160 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PDE6CP51160 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDE6CP51160 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.94■■□□□ 1.1
PDE6CP51160 AC105036.2-201ENST00000569468 176 ntBASIC21.94■■□□□ 1.1
PDE6CP51160 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.94■■□□□ 1.1
PDE6CP51160 AC069236.1-201ENST00000604339 616 ntBASIC21.94■■□□□ 1.1
PDE6CP51160 OR10C1-204ENST00000622521 1039 ntBASIC21.94■■□□□ 1.1
PDE6CP51160 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.94■■□□□ 1.1
PDE6CP51160 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6CP51160 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PDE6CP51160 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.93■■□□□ 1.1
PDE6CP51160 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 CYP2T1P-201ENST00000432607 1285 ntBASIC21.93■■□□□ 1.1
PDE6CP51160 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PDE6CP51160 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.93■■□□□ 1.1
PDE6CP51160 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6CP51160 AC068338.2-201ENST00000563278 1430 ntBASIC21.93■■□□□ 1.1
PDE6CP51160 AL162412.1-201ENST00000567129 965 ntBASIC21.93■■□□□ 1.1
PDE6CP51160 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6CP51160 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PDE6CP51160 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6CP51160 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.92■■□□□ 1.1
PDE6CP51160 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.92■■□□□ 1.1
PDE6CP51160 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6CP51160 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6CP51160 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6CP51160 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.92■■□□□ 1.1
PDE6CP51160 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PDE6CP51160 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.92■■□□□ 1.1
PDE6CP51160 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.92■■□□□ 1.1
PDE6CP51160 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6CP51160 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
PDE6CP51160 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.92■■□□□ 1.1
PDE6CP51160 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDE6CP51160 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6CP51160 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms