Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB28P51157 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB28P51157 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB28P51157 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB28P51157 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB28P51157 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB28P51157 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB28P51157 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB28P51157 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.69■□□□□ 0.74
RAB28P51157 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.69■□□□□ 0.74
RAB28P51157 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.69■□□□□ 0.74
RAB28P51157 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB28P51157 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB28P51157 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB28P51157 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB28P51157 MYC-209ENST00000641252 345 ntBASIC19.69■□□□□ 0.74
RAB28P51157 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RAB28P51157 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB28P51157 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB28P51157 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB28P51157 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB28P51157 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB28P51157 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
RAB28P51157 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB28P51157 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB28P51157 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB28P51157 AC097658.1-201ENST00000475555 843 ntBASIC19.68■□□□□ 0.74
RAB28P51157 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB28P51157 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB28P51157 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
RAB28P51157 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB28P51157 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB28P51157 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB28P51157 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB28P51157 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
RAB28P51157 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB28P51157 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB28P51157 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RAB28P51157 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB28P51157 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB28P51157 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB28P51157 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB28P51157 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB28P51157 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB28P51157 C2orf69P4-201ENST00000565394 541 ntBASIC19.66■□□□□ 0.74
RAB28P51157 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB28P51157 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB28P51157 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB28P51157 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB28P51157 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB28P51157 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB28P51157 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB28P51157 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB28P51157 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.65■□□□□ 0.74
RAB28P51157 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB28P51157 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB28P51157 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RAB28P51157 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.65■□□□□ 0.74
RAB28P51157 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB28P51157 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB28P51157 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB28P51157 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
RAB28P51157 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB28P51157 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RAB28P51157 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms