Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TUBP50607 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.44■■□□□ 1.02
TUBP50607 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.44■■□□□ 1.02
TUBP50607 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 AL049796.1-201ENST00000565336 1766 ntBASIC21.43■■□□□ 1.02
TUBP50607 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.43■■□□□ 1.02
TUBP50607 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TUBP50607 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.43■■□□□ 1.02
TUBP50607 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
TUBP50607 TSPY20P-201ENST00000450910 630 ntBASIC21.43■■□□□ 1.02
TUBP50607 RNA5SP413-201ENST00000516373 109 ntBASIC21.43■■□□□ 1.02
TUBP50607 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.43■■□□□ 1.02
TUBP50607 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.43■■□□□ 1.02
TUBP50607 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.43■■□□□ 1.02
TUBP50607 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.43■■□□□ 1.02
TUBP50607 AC105020.6-201ENST00000621523 1217 ntBASIC21.43■■□□□ 1.02
TUBP50607 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 AC087633.2-202ENST00000565166 1439 ntBASIC21.43■■□□□ 1.02
TUBP50607 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.43■■□□□ 1.02
TUBP50607 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TUBP50607 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TUBP50607 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.42■■□□□ 1.02
TUBP50607 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
TUBP50607 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
TUBP50607 MIR4651-201ENST00000582622 73 ntBASIC21.42■■□□□ 1.02
TUBP50607 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TUBP50607 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.42■■□□□ 1.02
TUBP50607 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.42■■□□□ 1.02
TUBP50607 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.41■■□□□ 1.02
TUBP50607 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TUBP50607 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBP50607 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBP50607 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBP50607 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBP50607 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.41■■□□□ 1.02
TUBP50607 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBP50607 PGM5P4-201ENST00000421970 445 ntBASIC21.41■■□□□ 1.02
TUBP50607 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.41■■□□□ 1.02
TUBP50607 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.41■■□□□ 1.02
TUBP50607 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBP50607 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TUBP50607 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TUBP50607 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TUBP50607 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBP50607 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
TUBP50607 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TUBP50607 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.4■■□□□ 1.02
TUBP50607 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBP50607 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TUBP50607 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBP50607 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.4■■□□□ 1.02
TUBP50607 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.4■■□□□ 1.02
TUBP50607 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBP50607 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TUBP50607 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBP50607 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TUBP50607 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TUBP50607 AC005229.4-201ENST00000610085 2198 ntBASIC21.4■■□□□ 1.02
TUBP50607 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.39■■□□□ 1.02
TUBP50607 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TUBP50607 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
TUBP50607 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TUBP50607 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.39■■□□□ 1.01
TUBP50607 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.39■■□□□ 1.01
TUBP50607 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.39■■□□□ 1.01
TUBP50607 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TUBP50607 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.39■■□□□ 1.01
TUBP50607 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.39■■□□□ 1.01
TUBP50607 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.39■■□□□ 1.01
TUBP50607 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.39■■□□□ 1.01
TUBP50607 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TUBP50607 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.39■■□□□ 1.01
TUBP50607 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.39■■□□□ 1.01
TUBP50607 AC011484.1-201ENST00000377652 1995 ntBASIC21.39■■□□□ 1.01
TUBP50607 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBP50607 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
TUBP50607 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.38■■□□□ 1.01
TUBP50607 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms