Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 GCD6YDR211W 2139 nt2.92□□□□□ -1.94
NIT3P49954 AKR1YDR264C 2295 nt2.91□□□□□ -1.94
NIT3P49954 PAC1YOR269W 1485 nt2.91□□□□□ -1.94
NIT3P49954 AI2Q0055 2565 nt2.91□□□□□ -1.94
NIT3P49954 YDL025W-AYDL025W-A 105 nt2.91□□□□□ -1.94
NIT3P49954 SPG3YDR504C 384 nt2.91□□□□□ -1.94
NIT3P49954 YGL014C-AYGL014C-A 162 nt2.91□□□□□ -1.94
NIT3P49954 YGL024WYGL024W 336 nt2.91□□□□□ -1.94
NIT3P49954 HRD3YLR207W 2502 nt2.91□□□□□ -1.94
NIT3P49954 ROG1YGL144C 2058 nt2.91□□□□□ -1.94
NIT3P49954 CDC20YGL116W 1833 nt2.91□□□□□ -1.94
NIT3P49954 FPR1YNL135C 345 nt2.9□□□□□ -1.95
NIT3P49954 OSH6YKR003W 1347 nt2.9□□□□□ -1.95
NIT3P49954 VPS35YJL154C 2835 nt2.89□□□□□ -1.95
NIT3P49954 HTL1YCR020W-B 237 nt2.89□□□□□ -1.95
NIT3P49954 YJL015CYJL015C 285 nt2.89□□□□□ -1.95
NIT3P49954 RPL36AYMR194W 303 nt2.89□□□□□ -1.95
NIT3P49954 GOT1YMR292W 417 nt2.89□□□□□ -1.95
NIT3P49954 NCL1YBL024W 2055 nt2.89□□□□□ -1.95
NIT3P49954 PRP6YBR055C 2700 nt2.89□□□□□ -1.95
NIT3P49954 NFT1YKR103W 3657 nt2.89□□□□□ -1.95
NIT3P49954 REC8YPR007C 2043 nt2.88□□□□□ -1.95
NIT3P49954 CIN8YEL061C 3003 nt2.88□□□□□ -1.95
NIT3P49954 PHD1YKL043W 1101 nt2.88□□□□□ -1.95
NIT3P49954 YTA7YGR270W 4140 nt2.87□□□□□ -1.95
NIT3P49954 UBP11YKR098C 2154 nt2.87□□□□□ -1.95
NIT3P49954 YIL080WYIL080W 4722 nt2.87□□□□□ -1.95
NIT3P49954 FIR1YER032W 2631 nt2.87□□□□□ -1.95
NIT3P49954 YGL149WYGL149W 306 nt2.87□□□□□ -1.95
NIT3P49954 YPR099CYPR099C 357 nt2.87□□□□□ -1.95
NIT3P49954 snR51snR51 107 nt2.87□□□□□ -1.95
NIT3P49954 YPR089WYPR089W 2667 nt2.87□□□□□ -1.95
NIT3P49954 PTC5YOR090C 1719 nt2.87□□□□□ -1.95
NIT3P49954 FLO11YIR019C 4104 nt2.87□□□□□ -1.95
NIT3P49954 CYC7YEL039C 342 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)DtK(UUU)D 73 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)G1tK(UUU)G1 73 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)G2tK(UUU)G2 73 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)KtK(UUU)K 73 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)LtK(UUU)L 73 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)OtK(UUU)O 73 nt2.86□□□□□ -1.95
NIT3P49954 tK(UUU)PtK(UUU)P 73 nt2.86□□□□□ -1.95
NIT3P49954 YGL069CYGL069C 465 nt2.86□□□□□ -1.95
NIT3P49954 SMD1YGR074W 441 nt2.86□□□□□ -1.95
NIT3P49954 YAL042C-AYAL042C-A 378 nt2.86□□□□□ -1.95
NIT3P49954 RPL36BYPL249C-A 303 nt2.86□□□□□ -1.95
NIT3P49954 SUL1YBR294W 2580 nt2.86□□□□□ -1.95
NIT3P49954 KSP1YHR082C 3090 nt2.86□□□□□ -1.95
NIT3P49954 SDC25YLL016W 3147 nt2.86□□□□□ -1.95
NIT3P49954 DUG2YBR281C 2637 nt2.85□□□□□ -1.95
NIT3P49954 ALG13YGL047W 609 nt2.85□□□□□ -1.95
NIT3P49954 YJL222W-BYJL222W-B 138 nt2.85□□□□□ -1.95
NIT3P49954 HTB2YBL002W 396 nt2.85□□□□□ -1.95
NIT3P49954 JLP2YMR132C 627 nt2.85□□□□□ -1.95
NIT3P49954 FLO5YHR211W 3228 nt2.85□□□□□ -1.95
NIT3P49954 SGD1YLR336C 2700 nt2.84□□□□□ -1.95
NIT3P49954 PAU10YDR542W 363 nt2.84□□□□□ -1.95
NIT3P49954 PAU11YGL261C 363 nt2.84□□□□□ -1.95
NIT3P49954 PHS1YJL097W 654 nt2.84□□□□□ -1.95
NIT3P49954 PAU4YLR461W 363 nt2.84□□□□□ -1.95
NIT3P49954 BFA1YJR053W 1725 nt2.84□□□□□ -1.96
NIT3P49954 IKI3YLR384C 4050 nt2.84□□□□□ -1.96
NIT3P49954 STT4YLR305C 5703 nt2.84□□□□□ -1.96
NIT3P49954 YDR344CYDR344C 444 nt2.83□□□□□ -1.96
NIT3P49954 NOP10YHR072W-A 177 nt2.83□□□□□ -1.96
NIT3P49954 MF(ALPHA)1YPL187W 498 nt2.83□□□□□ -1.96
NIT3P49954 DBP7YKR024C 2229 nt2.83□□□□□ -1.96
NIT3P49954 YML037CYML037C 1023 nt2.82□□□□□ -1.96
NIT3P49954 MRPL33YMR286W 261 nt2.82□□□□□ -1.96
NIT3P49954 DOT6YER088C 2013 nt2.81□□□□□ -1.96
NIT3P49954 YDR048CYDR048C 315 nt2.81□□□□□ -1.96
NIT3P49954 YOR225WYOR225W 330 nt2.81□□□□□ -1.96
NIT3P49954 SNQ2YDR011W 4506 nt2.81□□□□□ -1.96
NIT3P49954 YHR080CYHR080C 4038 nt2.81□□□□□ -1.96
NIT3P49954 PAN3YKL025C 2040 nt2.8□□□□□ -1.96
NIT3P49954 PRP8YHR165C 7242 nt2.8□□□□□ -1.96
NIT3P49954 YSP2YDR326C 4317 nt2.8□□□□□ -1.96
NIT3P49954 MMS1YPR164W 4224 nt2.8□□□□□ -1.96
NIT3P49954 snR80snR80 171 nt2.8□□□□□ -1.96
NIT3P49954 YGL063C-AYGL063C-A 150 nt2.8□□□□□ -1.96
NIT3P49954 SNC2YOR327C 348 nt2.8□□□□□ -1.96
NIT3P49954 RAX2YLR084C 3663 nt2.8□□□□□ -1.96
NIT3P49954 GCV2YMR189W 3105 nt2.79□□□□□ -1.96
NIT3P49954 RBK1YCR036W 1002 nt2.79□□□□□ -1.96
NIT3P49954 YDL062WYDL062W 426 nt2.79□□□□□ -1.96
NIT3P49954 tM(CAU)Q1tM(CAU)Q1 76 nt2.79□□□□□ -1.96
NIT3P49954 YGR069WYGR069W 336 nt2.79□□□□□ -1.96
NIT3P49954 YGR265WYGR265W 411 nt2.79□□□□□ -1.96
NIT3P49954 YHL041WYHL041W 450 nt2.79□□□□□ -1.96
NIT3P49954 YHR086W-AYHR086W-A 162 nt2.79□□□□□ -1.96
NIT3P49954 SAR1YPL218W 573 nt2.79□□□□□ -1.96
NIT3P49954 YBT1YLL048C 4986 nt2.79□□□□□ -1.96
NIT3P49954 JSN1YJR091C 3276 nt2.78□□□□□ -1.96
NIT3P49954 TFC4YGR047C 3078 nt2.78□□□□□ -1.96
NIT3P49954 YCR018C-AYCR018C-A 255 nt2.78□□□□□ -1.96
NIT3P49954 FMP16YDR070C 282 nt2.78□□□□□ -1.96
NIT3P49954 YIL102CYIL102C 306 nt2.78□□□□□ -1.96
NIT3P49954 YLR154W-EYLR154W-E 204 nt2.78□□□□□ -1.96
NIT3P49954 SSN2YDR443C 4263 nt2.78□□□□□ -1.96
NIT3P49954 ARO1YDR127W 4767 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms