Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CSNK1DP48730 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.48■□□□□ 0.87
CSNK1DP48730 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.48■□□□□ 0.87
CSNK1DP48730 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 HLA-B-256ENST00000639848 1089 ntBASIC20.48■□□□□ 0.87
CSNK1DP48730 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
CSNK1DP48730 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.48■□□□□ 0.87
CSNK1DP48730 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1DP48730 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.48■□□□□ 0.87
CSNK1DP48730 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.47■□□□□ 0.87
CSNK1DP48730 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.47■□□□□ 0.87
CSNK1DP48730 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.47■□□□□ 0.87
CSNK1DP48730 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CSNK1DP48730 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.47■□□□□ 0.87
CSNK1DP48730 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1DP48730 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.47■□□□□ 0.87
CSNK1DP48730 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CSNK1DP48730 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1DP48730 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1DP48730 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.47■□□□□ 0.87
CSNK1DP48730 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1DP48730 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1DP48730 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.46■□□□□ 0.87
CSNK1DP48730 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1DP48730 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1DP48730 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.46■□□□□ 0.87
CSNK1DP48730 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.46■□□□□ 0.87
CSNK1DP48730 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.46■□□□□ 0.87
CSNK1DP48730 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
CSNK1DP48730 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.46■□□□□ 0.87
CSNK1DP48730 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.46■□□□□ 0.87
CSNK1DP48730 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CSNK1DP48730 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CSNK1DP48730 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1DP48730 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.46■□□□□ 0.87
CSNK1DP48730 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.45■□□□□ 0.86
CSNK1DP48730 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CSNK1DP48730 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 AC060766.5-201ENST00000590539 871 ntBASIC20.45■□□□□ 0.86
CSNK1DP48730 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.45■□□□□ 0.86
CSNK1DP48730 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.45■□□□□ 0.86
CSNK1DP48730 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.45■□□□□ 0.86
CSNK1DP48730 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CSNK1DP48730 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1DP48730 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1DP48730 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.44■□□□□ 0.86
CSNK1DP48730 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1DP48730 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CSNK1DP48730 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CSNK1DP48730 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.44■□□□□ 0.86
CSNK1DP48730 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1DP48730 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.44■□□□□ 0.86
CSNK1DP48730 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1DP48730 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.44■□□□□ 0.86
CSNK1DP48730 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1DP48730 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.44■□□□□ 0.86
CSNK1DP48730 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
CSNK1DP48730 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CSNK1DP48730 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CSNK1DP48730 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.43■□□□□ 0.86
CSNK1DP48730 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CSNK1DP48730 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.43■□□□□ 0.86
CSNK1DP48730 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.43■□□□□ 0.86
CSNK1DP48730 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.43■□□□□ 0.86
CSNK1DP48730 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CSNK1DP48730 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.43■□□□□ 0.86
CSNK1DP48730 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.43■□□□□ 0.86
CSNK1DP48730 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms