Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RXRGP48443 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RXRGP48443 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RXRGP48443 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.33■□□□□ 0.85
RXRGP48443 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 AC007322.3-201ENST00000426526 701 ntBASIC20.33■□□□□ 0.85
RXRGP48443 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.33■□□□□ 0.85
RXRGP48443 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.33■□□□□ 0.85
RXRGP48443 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.33■□□□□ 0.85
RXRGP48443 RPS2P4-201ENST00000476944 856 ntBASIC20.33■□□□□ 0.85
RXRGP48443 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRGP48443 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RXRGP48443 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RXRGP48443 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RXRGP48443 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
RXRGP48443 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.32■□□□□ 0.84
RXRGP48443 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRGP48443 AC010542.4-201ENST00000563151 1910 ntBASIC20.32■□□□□ 0.84
RXRGP48443 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRGP48443 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RXRGP48443 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.32■□□□□ 0.84
RXRGP48443 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRGP48443 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RXRGP48443 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRGP48443 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.32■□□□□ 0.84
RXRGP48443 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRGP48443 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRGP48443 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RXRGP48443 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RXRGP48443 UBE2SP1-201ENST00000450587 669 ntBASIC20.31■□□□□ 0.84
RXRGP48443 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.31■□□□□ 0.84
RXRGP48443 UNC93B4-201ENST00000505679 747 ntBASIC20.31■□□□□ 0.84
RXRGP48443 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RXRGP48443 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RXRGP48443 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRGP48443 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
RXRGP48443 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RXRGP48443 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRGP48443 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
RXRGP48443 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRGP48443 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.31■□□□□ 0.84
RXRGP48443 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RXRGP48443 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRGP48443 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RXRGP48443 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRGP48443 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RXRGP48443 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRGP48443 AL596275.1-201ENST00000423464 877 ntBASIC20.3■□□□□ 0.84
RXRGP48443 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRGP48443 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.3■□□□□ 0.84
RXRGP48443 PNMA6B-201ENST00000538162 1200 ntBASIC20.3■□□□□ 0.84
RXRGP48443 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRGP48443 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRGP48443 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
RXRGP48443 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRGP48443 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RXRGP48443 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
RXRGP48443 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms