Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 tW(CCA)G2tW(CCA)G2 72 nt2.15□□□□□ -2.07
SSN8P47821 tW(CCA)JtW(CCA)J 72 nt2.15□□□□□ -2.07
SSN8P47821 tW(CCA)KtW(CCA)K 72 nt2.15□□□□□ -2.07
SSN8P47821 tW(CCA)MtW(CCA)M 72 nt2.15□□□□□ -2.07
SSN8P47821 tW(CCA)PtW(CCA)P 72 nt2.15□□□□□ -2.07
SSN8P47821 NFU1YKL040C 771 nt2.15□□□□□ -2.07
SSN8P47821 RPS22BYLR367W 393 nt2.15□□□□□ -2.07
SSN8P47821 AIM32YML050W 936 nt2.15□□□□□ -2.07
SSN8P47821 FYV12YOR183W 390 nt2.15□□□□□ -2.07
SSN8P47821 YJL070CYJL070C 2667 nt2.15□□□□□ -2.07
SSN8P47821 SKP2YNL311C 2292 nt2.15□□□□□ -2.07
SSN8P47821 CBF2YGR140W 2871 nt2.15□□□□□ -2.07
SSN8P47821 COS111YBR203W 2775 nt2.15□□□□□ -2.07
SSN8P47821 INP53YOR109W 3324 nt2.14□□□□□ -2.07
SSN8P47821 YDL041WYDL041W 354 nt2.14□□□□□ -2.07
SSN8P47821 SDC1YDR469W 528 nt2.14□□□□□ -2.07
SSN8P47821 YER087C-AYER087C-A 552 nt2.14□□□□□ -2.07
SSN8P47821 UBC7YMR022W 498 nt2.14□□□□□ -2.07
SSN8P47821 YOR055WYOR055W 435 nt2.14□□□□□ -2.07
SSN8P47821 SLM6YBR266C 453 nt2.14□□□□□ -2.07
SSN8P47821 YBR277CYBR277C 402 nt2.14□□□□□ -2.07
SSN8P47821 YPR089WYPR089W 2667 nt2.14□□□□□ -2.07
SSN8P47821 UBR1YGR184C 5853 nt2.13□□□□□ -2.07
SSN8P47821 NAN1YPL126W 2691 nt2.13□□□□□ -2.07
SSN8P47821 YDL068WYDL068W 330 nt2.13□□□□□ -2.07
SSN8P47821 TWF1YGR080W 999 nt2.13□□□□□ -2.07
SSN8P47821 YHR032W-AYHR032W-A 180 nt2.13□□□□□ -2.07
SSN8P47821 YKL063CYKL063C 504 nt2.13□□□□□ -2.07
SSN8P47821 SHE2YKL130C 741 nt2.13□□□□□ -2.07
SSN8P47821 IPT1YDR072C 1584 nt2.13□□□□□ -2.07
SSN8P47821 DNF1YER166W 4716 nt2.13□□□□□ -2.07
SSN8P47821 MPH1YIR002C 2982 nt2.12□□□□□ -2.07
SSN8P47821 REV1YOR346W 2958 nt2.12□□□□□ -2.07
SSN8P47821 YDR157WYDR157W 402 nt2.12□□□□□ -2.07
SSN8P47821 YDR269CYDR269C 324 nt2.12□□□□□ -2.07
SSN8P47821 YMR320WYMR320W 306 nt2.12□□□□□ -2.07
SSN8P47821 NUP100YKL068W 2880 nt2.12□□□□□ -2.07
SSN8P47821 PES4YFR023W 1836 nt2.12□□□□□ -2.07
SSN8P47821 YJL016WYJL016W 1686 nt2.12□□□□□ -2.07
SSN8P47821 YEL043WYEL043W 2871 nt2.12□□□□□ -2.07
SSN8P47821 SPO23YBR250W 1572 nt2.11□□□□□ -2.07
SSN8P47821 YDL025W-AYDL025W-A 105 nt2.11□□□□□ -2.07
SSN8P47821 YER068C-AYER068C-A 432 nt2.11□□□□□ -2.07
SSN8P47821 YHR138CYHR138C 345 nt2.11□□□□□ -2.07
SSN8P47821 YOL159CYOL159C 516 nt2.11□□□□□ -2.07
SSN8P47821 ROX1YPR065W 1107 nt2.11□□□□□ -2.07
SSN8P47821 BFA1YJR053W 1725 nt2.11□□□□□ -2.07
SSN8P47821 PDR11YIL013C 4236 nt2.1□□□□□ -2.07
SSN8P47821 SWF1YDR126W 1011 nt2.1□□□□□ -2.07
SSN8P47821 BTT1YDR252W 450 nt2.1□□□□□ -2.07
SSN8P47821 YHR071C-AYHR071C-A 321 nt2.1□□□□□ -2.07
SSN8P47821 YML084WYML084W 309 nt2.1□□□□□ -2.07
SSN8P47821 ZEO1YOL109W 342 nt2.1□□□□□ -2.07
SSN8P47821 UBP11YKR098C 2154 nt2.1□□□□□ -2.07
SSN8P47821 IRC10YOL015W 1761 nt2.1□□□□□ -2.07
SSN8P47821 SPC72YAL047C 1869 nt2.09□□□□□ -2.07
SSN8P47821 VPS16YPL045W 2397 nt2.09□□□□□ -2.07
SSN8P47821 YBL005W-BYBL005W-B 5268 nt2.09□□□□□ -2.07
SSN8P47821 NIC96YFR002W 2520 nt2.09□□□□□ -2.07
SSN8P47821 snR56snR56 88 nt2.09□□□□□ -2.07
SSN8P47821 IES5YER092W 378 nt2.09□□□□□ -2.07
SSN8P47821 NOP10YHR072W-A 177 nt2.09□□□□□ -2.07
SSN8P47821 YHR214W-AYHR214W-A 486 nt2.09□□□□□ -2.07
SSN8P47821 YAR068WYAR068W 486 nt2.09□□□□□ -2.07
SSN8P47821 USO1YDL058W 5373 nt2.09□□□□□ -2.07
SSN8P47821 PDR3YBL005W 2931 nt2.09□□□□□ -2.08
SSN8P47821 CDC24YAL041W 2565 nt2.08□□□□□ -2.08
SSN8P47821 SNU114YKL173W 3027 nt2.08□□□□□ -2.08
SSN8P47821 YGL014C-AYGL014C-A 162 nt2.08□□□□□ -2.08
SSN8P47821 PAU8YAL068C 363 nt2.08□□□□□ -2.08
SSN8P47821 GRX8YLR364W 330 nt2.08□□□□□ -2.08
SSN8P47821 PAU20YOL161C 363 nt2.08□□□□□ -2.08
SSN8P47821 ERP4YOR016C 624 nt2.08□□□□□ -2.08
SSN8P47821 RTC6YPL183W-A 282 nt2.08□□□□□ -2.08
SSN8P47821 COX1Q0045 1605 nt2.08□□□□□ -2.08
SSN8P47821 YPR097WYPR097W 3222 nt2.08□□□□□ -2.08
SSN8P47821 SPP41YDR464W 4308 nt2.08□□□□□ -2.08
SSN8P47821 OSW7YFR039C 1533 nt2.07□□□□□ -2.08
SSN8P47821 snR79snR79 84 nt2.07□□□□□ -2.08
SSN8P47821 YFR056CYFR056C 369 nt2.07□□□□□ -2.08
SSN8P47821 SMD1YGR074W 441 nt2.07□□□□□ -2.08
SSN8P47821 VOA1YGR106C 798 nt2.07□□□□□ -2.08
SSN8P47821 LSO2YGR169C-A 279 nt2.07□□□□□ -2.08
SSN8P47821 YIL156W-BYIL156W-B 222 nt2.07□□□□□ -2.08
SSN8P47821 UTP30YKR060W 825 nt2.07□□□□□ -2.08
SSN8P47821 EMC6YLL014W 327 nt2.07□□□□□ -2.08
SSN8P47821 YMR001C-AYMR001C-A 231 nt2.07□□□□□ -2.08
SSN8P47821 PHO91YNR013C 2685 nt2.07□□□□□ -2.08
SSN8P47821 NUP120YKL057C 3114 nt2.06□□□□□ -2.08
SSN8P47821 RAV1YJR033C 4074 nt2.06□□□□□ -2.08
SSN8P47821 snR70snR70 164 nt2.06□□□□□ -2.08
SSN8P47821 YER023C-AYER023C-A 213 nt2.06□□□□□ -2.08
SSN8P47821 AYR1YIL124W 894 nt2.06□□□□□ -2.08
SSN8P47821 YLR334CYLR334C 381 nt2.06□□□□□ -2.08
SSN8P47821 UBP2YOR124C 3819 nt2.06□□□□□ -2.08
SSN8P47821 YPR012WYPR012W 255 nt2.06□□□□□ -2.08
SSN8P47821 YBR285WYBR285W 435 nt2.06□□□□□ -2.08
SSN8P47821 STE11YLR362W 2154 nt2.06□□□□□ -2.08
SSN8P47821 MKT1YNL085W 2493 nt2.06□□□□□ -2.08
SSN8P47821 GIS1YDR096W 2685 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 55.3 ms