Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 FAR1YJL157C 2493 nt3.39□□□□□ -1.87
VPS53P47061 ENA2YDR039C 3276 nt3.39□□□□□ -1.87
VPS53P47061 ENA1YDR040C 3276 nt3.39□□□□□ -1.87
VPS53P47061 YGR151CYGR151C 336 nt3.39□□□□□ -1.87
VPS53P47061 HTB2YBL002W 396 nt3.39□□□□□ -1.87
VPS53P47061 CCW14YLR390W-A 717 nt3.39□□□□□ -1.87
VPS53P47061 YOL155W-AYOL155W-A 135 nt3.39□□□□□ -1.87
VPS53P47061 DBP6YNR038W 1890 nt3.39□□□□□ -1.87
VPS53P47061 FLO1YAR050W 4614 nt3.39□□□□□ -1.87
VPS53P47061 YME2YMR302C 2553 nt3.38□□□□□ -1.87
VPS53P47061 RPS17BYDR447C 411 nt3.38□□□□□ -1.87
VPS53P47061 LEU3YLR451W 2661 nt3.37□□□□□ -1.87
VPS53P47061 MET10YFR030W 3108 nt3.37□□□□□ -1.87
VPS53P47061 DOA4YDR069C 2781 nt3.37□□□□□ -1.87
VPS53P47061 APC11YDL008W 498 nt3.37□□□□□ -1.87
VPS53P47061 YBR064WYBR064W 429 nt3.37□□□□□ -1.87
VPS53P47061 YPR146CYPR146C 330 nt3.37□□□□□ -1.87
VPS53P47061 YOR296WYOR296W 3870 nt3.37□□□□□ -1.87
VPS53P47061 VPS64YDR200C 1815 nt3.37□□□□□ -1.87
VPS53P47061 CHO2YGR157W 2610 nt3.37□□□□□ -1.87
VPS53P47061 EPL1YFL024C 2499 nt3.36□□□□□ -1.87
VPS53P47061 SKT5YBL061C 2091 nt3.36□□□□□ -1.87
VPS53P47061 YIL102CYIL102C 306 nt3.36□□□□□ -1.87
VPS53P47061 RPA34YJL148W 702 nt3.36□□□□□ -1.87
VPS53P47061 YOR008C-AYOR008C-A 225 nt3.36□□□□□ -1.87
VPS53P47061 COG3YER157W 2406 nt3.35□□□□□ -1.87
VPS53P47061 FUS1YCL027W 1539 nt3.35□□□□□ -1.87
VPS53P47061 YER121WYER121W 345 nt3.35□□□□□ -1.87
VPS53P47061 PHD1YKL043W 1101 nt3.35□□□□□ -1.87
VPS53P47061 YOR011W-AYOR011W-A 207 nt3.35□□□□□ -1.87
VPS53P47061 TCP1YDR212W 1680 nt3.34□□□□□ -1.87
VPS53P47061 RPL23BYER117W 414 nt3.34□□□□□ -1.87
VPS53P47061 YMR31YFR049W 372 nt3.34□□□□□ -1.87
VPS53P47061 RPS28BYLR264W 204 nt3.34□□□□□ -1.87
VPS53P47061 TRM7YBR061C 933 nt3.34□□□□□ -1.87
VPS53P47061 SSE1YPL106C 2082 nt3.34□□□□□ -1.88
VPS53P47061 TAF2YCR042C 4224 nt3.33□□□□□ -1.88
VPS53P47061 YGL239CYGL239C 315 nt3.33□□□□□ -1.88
VPS53P47061 TIM13YGR181W 318 nt3.33□□□□□ -1.88
VPS53P47061 tQ(UUG)BtQ(UUG)B 72 nt3.33□□□□□ -1.88
VPS53P47061 YBL065WYBL065W 345 nt3.33□□□□□ -1.88
VPS53P47061 ENA5YDR038C 3276 nt3.33□□□□□ -1.88
VPS53P47061 TAO3YIL129C 7131 nt3.33□□□□□ -1.88
VPS53P47061 YIL032CYIL032C 357 nt3.32□□□□□ -1.88
VPS53P47061 YJL222W-BYJL222W-B 138 nt3.32□□□□□ -1.88
VPS53P47061 YMR324CYMR324C 243 nt3.32□□□□□ -1.88
VPS53P47061 NPR2YEL062W 1848 nt3.32□□□□□ -1.88
VPS53P47061 BCH1YMR237W 2175 nt3.32□□□□□ -1.88
VPS53P47061 DIA2YOR080W 2199 nt3.32□□□□□ -1.88
VPS53P47061 CHS2YBR038W 2892 nt3.32□□□□□ -1.88
VPS53P47061 YDR034C-DYDR034C-D 5313 nt3.31□□□□□ -1.88
VPS53P47061 ECM25YJL201W 1800 nt3.31□□□□□ -1.88
VPS53P47061 COG8YML071C 1824 nt3.31□□□□□ -1.88
VPS53P47061 YDL007C-AYDL007C-A 258 nt3.31□□□□□ -1.88
VPS53P47061 RPL40AYIL148W 387 nt3.31□□□□□ -1.88
VPS53P47061 YLR154C-HYLR154C-H 132 nt3.31□□□□□ -1.88
VPS53P47061 YLR156C-AYLR156C-A 132 nt3.31□□□□□ -1.88
VPS53P47061 YLR157C-CYLR157C-C 132 nt3.31□□□□□ -1.88
VPS53P47061 YLR159C-AYLR159C-A 132 nt3.31□□□□□ -1.88
VPS53P47061 YBR121C-AYBR121C-A 159 nt3.31□□□□□ -1.88
VPS53P47061 ROG1YGL144C 2058 nt3.31□□□□□ -1.88
VPS53P47061 YIL166CYIL166C 1629 nt3.3□□□□□ -1.88
VPS53P47061 RCY1YJL204C 2523 nt3.3□□□□□ -1.88
VPS53P47061 BNA4YBL098W 1383 nt3.3□□□□□ -1.88
VPS53P47061 DYN1YKR054C 12279 nt3.3□□□□□ -1.88
VPS53P47061 YRB1YDR002W 606 nt3.3□□□□□ -1.88
VPS53P47061 LCL2YLR104W 396 nt3.3□□□□□ -1.88
VPS53P47061 BUB1YGR188C 3066 nt3.3□□□□□ -1.88
VPS53P47061 ORC1YML065W 2745 nt3.29□□□□□ -1.88
VPS53P47061 AYR1YIL124W 894 nt3.29□□□□□ -1.88
VPS53P47061 YNL338WYNL338W 159 nt3.29□□□□□ -1.88
VPS53P47061 EXO84YBR102C 2262 nt3.29□□□□□ -1.88
VPS53P47061 SPO71YDR104C 3738 nt3.29□□□□□ -1.88
VPS53P47061 POL2YNL262W 6669 nt3.29□□□□□ -1.88
VPS53P47061 BUD4YJR092W 4344 nt3.28□□□□□ -1.88
VPS53P47061 YHL042WYHL042W 453 nt3.28□□□□□ -1.88
VPS53P47061 RPL20BYOR312C 519 nt3.28□□□□□ -1.88
VPS53P47061 TFC1YBR123C 1950 nt3.28□□□□□ -1.88
VPS53P47061 RPL36AYMR194W 303 nt3.27□□□□□ -1.89
VPS53P47061 snR55snR55 98 nt3.26□□□□□ -1.89
VPS53P47061 snR70snR70 164 nt3.26□□□□□ -1.89
VPS53P47061 QCR7YDR529C 384 nt3.26□□□□□ -1.89
VPS53P47061 YOR302WYOR302W 78 nt3.26□□□□□ -1.89
VPS53P47061 SAR1YPL218W 573 nt3.26□□□□□ -1.89
VPS53P47061 BOI1YBL085W 2943 nt3.25□□□□□ -1.89
VPS53P47061 TIM11YDR322C-A 291 nt3.25□□□□□ -1.89
VPS53P47061 LSO2YGR169C-A 279 nt3.25□□□□□ -1.89
VPS53P47061 KEL2YGR238C 2649 nt3.25□□□□□ -1.89
VPS53P47061 ASG1YIL130W 2895 nt3.24□□□□□ -1.89
VPS53P47061 RLF2YPR018W 1821 nt3.24□□□□□ -1.89
VPS53P47061 DIS3YOL021C 3006 nt3.24□□□□□ -1.89
VPS53P47061 PSO2YMR137C 1986 nt3.24□□□□□ -1.89
VPS53P47061 RIM20YOR275C 1986 nt3.24□□□□□ -1.89
VPS53P47061 YDL185C-AYDL185C-A 228 nt3.24□□□□□ -1.89
VPS53P47061 RPL25YOL127W 429 nt3.24□□□□□ -1.89
VPS53P47061 SOK2YMR016C 2358 nt3.24□□□□□ -1.89
VPS53P47061 MVP1YMR004W 1536 nt3.24□□□□□ -1.89
VPS53P47061 RIX1YHR197W 2292 nt3.23□□□□□ -1.89
VPS53P47061 YDR210W-BYDR210W-B 5313 nt3.23□□□□□ -1.89
VPS53P47061 YDR261W-BYDR261W-B 5313 nt3.23□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms