Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.01■■□□□ 1.75
COL15A1P39059 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
COL15A1P39059 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
COL15A1P39059 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
COL15A1P39059 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26■■□□□ 1.75
COL15A1P39059 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
COL15A1P39059 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26■■□□□ 1.75
COL15A1P39059 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26■■□□□ 1.75
COL15A1P39059 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL15A1P39059 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.99■■□□□ 1.75
COL15A1P39059 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL15A1P39059 KRT17P2-201ENST00000300992 1314 ntBASIC25.99■■□□□ 1.75
COL15A1P39059 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.99■■□□□ 1.75
COL15A1P39059 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
COL15A1P39059 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.99■■□□□ 1.75
COL15A1P39059 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
COL15A1P39059 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.99■■□□□ 1.75
COL15A1P39059 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.99■■□□□ 1.75
COL15A1P39059 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.99■■□□□ 1.75
COL15A1P39059 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.99■■□□□ 1.75
COL15A1P39059 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.99■■□□□ 1.75
COL15A1P39059 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.99■■□□□ 1.75
COL15A1P39059 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.99■■□□□ 1.75
COL15A1P39059 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL15A1P39059 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL15A1P39059 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.99■■□□□ 1.75
COL15A1P39059 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
COL15A1P39059 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL15A1P39059 AL135905.2-201ENST00000584934 1404 ntBASIC25.99■■□□□ 1.75
COL15A1P39059 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
COL15A1P39059 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.98■■□□□ 1.75
COL15A1P39059 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.98■■□□□ 1.75
COL15A1P39059 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.98■■□□□ 1.75
COL15A1P39059 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.98■■□□□ 1.75
COL15A1P39059 MIR4785-201ENST00000585005 73 ntBASIC25.98■■□□□ 1.75
COL15A1P39059 AC010331.1-201ENST00000611423 582 ntBASIC25.98■■□□□ 1.75
COL15A1P39059 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.98■■□□□ 1.75
COL15A1P39059 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.98■■□□□ 1.75
COL15A1P39059 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.98■■□□□ 1.75
COL15A1P39059 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
COL15A1P39059 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
COL15A1P39059 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL15A1P39059 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.97■■□□□ 1.75
COL15A1P39059 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.97■■□□□ 1.75
COL15A1P39059 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.97■■□□□ 1.75
COL15A1P39059 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.97■■□□□ 1.75
COL15A1P39059 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COL15A1P39059 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.97■■□□□ 1.75
COL15A1P39059 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.97■■□□□ 1.75
COL15A1P39059 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.97■■□□□ 1.75
COL15A1P39059 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL15A1P39059 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.97■■□□□ 1.75
COL15A1P39059 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 TSPY15P-201ENST00000457163 923 ntBASIC25.96■■□□□ 1.75
COL15A1P39059 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.96■■□□□ 1.75
COL15A1P39059 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.96■■□□□ 1.75
COL15A1P39059 AP001412.1-201ENST00000608405 714 ntBASIC25.96■■□□□ 1.75
COL15A1P39059 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
COL15A1P39059 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
COL15A1P39059 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.96■■□□□ 1.75
COL15A1P39059 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL15A1P39059 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.96■■□□□ 1.75
COL15A1P39059 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.95■■□□□ 1.75
COL15A1P39059 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
COL15A1P39059 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.95■■□□□ 1.75
COL15A1P39059 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.95■■□□□ 1.75
COL15A1P39059 RARRES2P10-201ENST00000564312 460 ntBASIC25.95■■□□□ 1.75
COL15A1P39059 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
COL15A1P39059 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL15A1P39059 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL15A1P39059 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.95■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms