Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 CGI121YML036W 546 nt2.58□□□□□ -2
VPS41P38959 FPR1YNL135C 345 nt2.58□□□□□ -2
VPS41P38959 YPR016W-AYPR016W-A 261 nt2.58□□□□□ -2
VPS41P38959 DAD3YBR233W-A 285 nt2.58□□□□□ -2
VPS41P38959 DNF1YER166W 4716 nt2.58□□□□□ -2
VPS41P38959 YRB1YDR002W 606 nt2.57□□□□□ -2
VPS41P38959 YMR31YFR049W 372 nt2.57□□□□□ -2
VPS41P38959 COX7YMR256C 183 nt2.57□□□□□ -2
VPS41P38959 EGD1YPL037C 474 nt2.57□□□□□ -2
VPS41P38959 YPL225WYPL225W 441 nt2.57□□□□□ -2
VPS41P38959 IRC8YJL051W 2469 nt2.57□□□□□ -2
VPS41P38959 ORC1YML065W 2745 nt2.56□□□□□ -2
VPS41P38959 SPC72YAL047C 1869 nt2.56□□□□□ -2
VPS41P38959 CDC50YCR094W 1176 nt2.56□□□□□ -2
VPS41P38959 YER181CYER181C 324 nt2.56□□□□□ -2
VPS41P38959 YIL058WYIL058W 285 nt2.56□□□□□ -2
VPS41P38959 YIL115W-AYIL115W-A 372 nt2.56□□□□□ -2
VPS41P38959 YBL108WYBL108W 306 nt2.56□□□□□ -2
VPS41P38959 RLF2YPR018W 1821 nt2.56□□□□□ -2
VPS41P38959 APC2YLR127C 2562 nt2.55□□□□□ -2
VPS41P38959 YFH1YDL120W 525 nt2.55□□□□□ -2
VPS41P38959 FYV4YHR059W 393 nt2.55□□□□□ -2
VPS41P38959 YHR078WYHR078W 1659 nt2.55□□□□□ -2
VPS41P38959 YAL059C-AYAL059C-A 423 nt2.55□□□□□ -2
VPS41P38959 AIM32YML050W 936 nt2.55□□□□□ -2
VPS41P38959 RPL25YOL127W 429 nt2.55□□□□□ -2
VPS41P38959 YOR146WYOR146W 306 nt2.55□□□□□ -2
VPS41P38959 NEW1YPL226W 3591 nt2.55□□□□□ -2
VPS41P38959 SDC25YLL016W 3147 nt2.55□□□□□ -2
VPS41P38959 YJL181WYJL181W 1836 nt2.54□□□□□ -2
VPS41P38959 HOS4YIL112W 3252 nt2.54□□□□□ -2
VPS41P38959 YGR050CYGR050C 357 nt2.54□□□□□ -2
VPS41P38959 ABM1YJR108W 372 nt2.54□□□□□ -2
VPS41P38959 COX14YML129C 213 nt2.54□□□□□ -2
VPS41P38959 YOL019W-AYOL019W-A 153 nt2.54□□□□□ -2
VPS41P38959 TRA1YHR099W 11235 nt2.54□□□□□ -2
VPS41P38959 YJL016WYJL016W 1686 nt2.53□□□□□ -2
VPS41P38959 YIL166CYIL166C 1629 nt2.53□□□□□ -2
VPS41P38959 MSS11YMR164C 2277 nt2.53□□□□□ -2
VPS41P38959 SEC16YPL085W 6588 nt2.53□□□□□ -2
VPS41P38959 CAJ1YER048C 1176 nt2.53□□□□□ -2
VPS41P38959 YHR052W-AYHR052W-A 195 nt2.53□□□□□ -2
VPS41P38959 YHR054W-AYHR054W-A 195 nt2.53□□□□□ -2
VPS41P38959 URM1YIL008W 300 nt2.53□□□□□ -2
VPS41P38959 YKL118WYKL118W 312 nt2.53□□□□□ -2
VPS41P38959 YMR193C-AYMR193C-A 387 nt2.53□□□□□ -2
VPS41P38959 VTI1YMR197C 654 nt2.53□□□□□ -2
VPS41P38959 ATP15YPL271W 189 nt2.53□□□□□ -2
VPS41P38959 TRS130YMR218C 3309 nt2.53□□□□□ -2
VPS41P38959 COX1Q0045 1605 nt2.53□□□□□ -2
VPS41P38959 YJR003CYJR003C 1560 nt2.53□□□□□ -2.01
VPS41P38959 BAS1YKR099W 2436 nt2.52□□□□□ -2.01
VPS41P38959 YDR186CYDR186C 2634 nt2.52□□□□□ -2.01
VPS41P38959 TIM9YEL020W-A 264 nt2.52□□□□□ -2.01
VPS41P38959 YOR105WYOR105W 327 nt2.52□□□□□ -2.01
VPS41P38959 YER189WYER189W 369 nt2.51□□□□□ -2.01
VPS41P38959 YIL156W-BYIL156W-B 222 nt2.51□□□□□ -2.01
VPS41P38959 HYR1YIR037W 492 nt2.51□□□□□ -2.01
VPS41P38959 MRPL31YKL138C 396 nt2.51□□□□□ -2.01
VPS41P38959 VMA9YCL005W-A 222 nt2.51□□□□□ -2.01
VPS41P38959 BRO1YPL084W 2535 nt2.51□□□□□ -2.01
VPS41P38959 SSE1YPL106C 2082 nt2.51□□□□□ -2.01
VPS41P38959 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
VPS41P38959 SGS1YMR190C 4344 nt2.5□□□□□ -2.01
VPS41P38959 YDL152WYDL152W 366 nt2.5□□□□□ -2.01
VPS41P38959 ADK1YDR226W 669 nt2.5□□□□□ -2.01
VPS41P38959 COA4YLR218C 453 nt2.5□□□□□ -2.01
VPS41P38959 RPS22BYLR367W 393 nt2.5□□□□□ -2.01
VPS41P38959 YMR031W-AYMR031W-A 327 nt2.5□□□□□ -2.01
VPS41P38959 YAF9YNL107W 681 nt2.5□□□□□ -2.01
VPS41P38959 OSW7YFR039C 1533 nt2.5□□□□□ -2.01
VPS41P38959 NUP82YJL061W 2142 nt2.5□□□□□ -2.01
VPS41P38959 snR76snR76 109 nt2.49□□□□□ -2.01
VPS41P38959 NHP2YDL208W 471 nt2.49□□□□□ -2.01
VPS41P38959 BIL1YOR304C-A 231 nt2.49□□□□□ -2.01
VPS41P38959 PUF4YGL014W 2667 nt2.49□□□□□ -2.01
VPS41P38959 ECM25YJL201W 1800 nt2.49□□□□□ -2.01
VPS41P38959 VPS52YDR484W 1926 nt2.48□□□□□ -2.01
VPS41P38959 YDR413CYDR413C 576 nt2.48□□□□□ -2.01
VPS41P38959 YHL037CYHL037C 402 nt2.48□□□□□ -2.01
VPS41P38959 MAM33YIL070C 801 nt2.48□□□□□ -2.01
VPS41P38959 YJL202CYJL202C 348 nt2.48□□□□□ -2.01
VPS41P38959 YAL042C-AYAL042C-A 378 nt2.48□□□□□ -2.01
VPS41P38959 YLR031WYLR031W 561 nt2.48□□□□□ -2.01
VPS41P38959 YOR050CYOR050C 348 nt2.48□□□□□ -2.01
VPS41P38959 YPL238CYPL238C 390 nt2.48□□□□□ -2.01
VPS41P38959 TOF1YNL273W 3717 nt2.48□□□□□ -2.01
VPS41P38959 SWT1YOR166C 1377 nt2.48□□□□□ -2.01
VPS41P38959 PHO91YNR013C 2685 nt2.47□□□□□ -2.01
VPS41P38959 PTP3YER075C 2787 nt2.47□□□□□ -2.01
VPS41P38959 YCR022CYCR022C 345 nt2.47□□□□□ -2.01
VPS41P38959 MBB1YJL199C 327 nt2.47□□□□□ -2.01
VPS41P38959 NCE101YJL205C 162 nt2.47□□□□□ -2.01
VPS41P38959 YAR053WYAR053W 297 nt2.47□□□□□ -2.01
VPS41P38959 TRM7YBR061C 933 nt2.47□□□□□ -2.01
VPS41P38959 MGR1YCL044C 1254 nt2.47□□□□□ -2.01
VPS41P38959 MCD1YDL003W 1701 nt2.47□□□□□ -2.01
VPS41P38959 KSP1YHR082C 3090 nt2.46□□□□□ -2.02
VPS41P38959 snR79snR79 84 nt2.46□□□□□ -2.02
VPS41P38959 tC(GCA)BtC(GCA)B 72 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms