Protein–RNA interactions for Protein: P35817

BDF1, Bromodomain-containing factor 1, yeastyeast

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF1P35817 TUP1YCR084C 2142 nt4.98□□□□□ -1.61
BDF1P35817 YDR193WYDR193W 399 nt4.98□□□□□ -1.61
BDF1P35817 tL(UAA)QtL(UAA)Q 85 nt4.98□□□□□ -1.61
BDF1P35817 YKL156C-AYKL156C-A 117 nt4.98□□□□□ -1.61
BDF1P35817 YBL065WYBL065W 345 nt4.98□□□□□ -1.61
BDF1P35817 ALO1YML086C 1581 nt4.98□□□□□ -1.61
BDF1P35817 NAB3YPL190C 2409 nt4.97□□□□□ -1.61
BDF1P35817 KHA1YJL094C 2622 nt4.97□□□□□ -1.61
BDF1P35817 RRN6YBL014C 2685 nt4.97□□□□□ -1.61
BDF1P35817 YJL206CYJL206C 2277 nt4.97□□□□□ -1.61
BDF1P35817 YDL118WYDL118W 381 nt4.97□□□□□ -1.61
BDF1P35817 AUA1YFL010W-A 285 nt4.97□□□□□ -1.61
BDF1P35817 URB2YJR041C 3525 nt4.97□□□□□ -1.61
BDF1P35817 NAT1YDL040C 2565 nt4.97□□□□□ -1.61
BDF1P35817 YPR003CYPR003C 2265 nt4.97□□□□□ -1.61
BDF1P35817 EGT2YNL327W 3126 nt4.97□□□□□ -1.61
BDF1P35817 DAL81YIR023W 2913 nt4.96□□□□□ -1.61
BDF1P35817 BBC1YJL020C 3474 nt4.96□□□□□ -1.61
BDF1P35817 snR17bsnR17b 332 nt4.96□□□□□ -1.62
BDF1P35817 TPS3YMR261C 3165 nt4.96□□□□□ -1.62
BDF1P35817 TCB3YML072C 4638 nt4.96□□□□□ -1.62
BDF1P35817 GPI13YLL031C 3054 nt4.96□□□□□ -1.62
BDF1P35817 USA1YML029W 2517 nt4.96□□□□□ -1.62
BDF1P35817 SLX4YLR135W 2247 nt4.95□□□□□ -1.62
BDF1P35817 ZIP2YGL249W 2115 nt4.95□□□□□ -1.62
BDF1P35817 YML116W-AYML116W-A 303 nt4.95□□□□□ -1.62
BDF1P35817 DOT6YER088C 2013 nt4.94□□□□□ -1.62
BDF1P35817 YOR019WYOR019W 2193 nt4.94□□□□□ -1.62
BDF1P35817 SKT5YBL061C 2091 nt4.94□□□□□ -1.62
BDF1P35817 SOD1YJR104C 465 nt4.94□□□□□ -1.62
BDF1P35817 RDN5-1RDN5-1 121 nt4.94□□□□□ -1.62
BDF1P35817 RDN5-6RDN5-6 121 nt4.94□□□□□ -1.62
BDF1P35817 YMR324CYMR324C 243 nt4.94□□□□□ -1.62
BDF1P35817 KIC1YHR102W 3243 nt4.94□□□□□ -1.62
BDF1P35817 PTC5YOR090C 1719 nt4.94□□□□□ -1.62
BDF1P35817 FRE2YKL220C 2136 nt4.93□□□□□ -1.62
BDF1P35817 snR7-SsnR7-S 179 nt4.93□□□□□ -1.62
BDF1P35817 TIM11YDR322C-A 291 nt4.93□□□□□ -1.62
BDF1P35817 YGR050CYGR050C 357 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)CtQ(UUG)C 72 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)D1tQ(UUG)D1 72 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)D2tQ(UUG)D2 72 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)D3tQ(UUG)D3 72 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)E1tQ(UUG)E1 72 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)HtQ(UUG)H 72 nt4.93□□□□□ -1.62
BDF1P35817 tQ(UUG)LtQ(UUG)L 72 nt4.93□□□□□ -1.62
BDF1P35817 COS111YBR203W 2775 nt4.93□□□□□ -1.62
BDF1P35817 RPL25YOL127W 429 nt4.92□□□□□ -1.62
BDF1P35817 CDC31YOR257W 486 nt4.92□□□□□ -1.62
BDF1P35817 YPL044CYPL044C 549 nt4.92□□□□□ -1.62
BDF1P35817 EFR3YMR212C 2349 nt4.92□□□□□ -1.62
BDF1P35817 ADP1YCR011C 3150 nt4.92□□□□□ -1.62
BDF1P35817 MCD4YKL165C 2760 nt4.91□□□□□ -1.62
BDF1P35817 CTF4YPR135W 2784 nt4.91□□□□□ -1.62
BDF1P35817 MUS81YDR386W 1899 nt4.91□□□□□ -1.62
BDF1P35817 TGL4YKR089C 2733 nt4.91□□□□□ -1.62
BDF1P35817 VPS53YJL029C 2469 nt4.9□□□□□ -1.62
BDF1P35817 PAN1YIR006C 4443 nt4.9□□□□□ -1.62
BDF1P35817 NUP2YLR335W 2163 nt4.9□□□□□ -1.62
BDF1P35817 KAR3YPR141C 2190 nt4.9□□□□□ -1.62
BDF1P35817 AXL2YIL140W 2472 nt4.9□□□□□ -1.63
BDF1P35817 NPR1YNL183C 2373 nt4.9□□□□□ -1.63
BDF1P35817 NOC3YLR002C 1992 nt4.89□□□□□ -1.63
BDF1P35817 LSO2YGR169C-A 279 nt4.89□□□□□ -1.63
BDF1P35817 INP2YMR163C 2118 nt4.89□□□□□ -1.63
BDF1P35817 MPT5YGL178W 2580 nt4.89□□□□□ -1.63
BDF1P35817 KRE6YPR159W 2163 nt4.88□□□□□ -1.63
BDF1P35817 SIP3YNL257C 3690 nt4.88□□□□□ -1.63
BDF1P35817 NUP85YJR042W 2235 nt4.87□□□□□ -1.63
BDF1P35817 snR81snR81 201 nt4.87□□□□□ -1.63
BDF1P35817 YDL196WYDL196W 330 nt4.87□□□□□ -1.63
BDF1P35817 HYP2YEL034W 474 nt4.87□□□□□ -1.63
BDF1P35817 YJR085CYJR085C 318 nt4.87□□□□□ -1.63
BDF1P35817 MDV1YJL112W 2145 nt4.87□□□□□ -1.63
BDF1P35817 BLM10YFL007W 6432 nt4.86□□□□□ -1.63
BDF1P35817 SLY1YDR189W 2001 nt4.86□□□□□ -1.63
BDF1P35817 YNL266WYNL266W 420 nt4.86□□□□□ -1.63
BDF1P35817 YBR225WYBR225W 2703 nt4.85□□□□□ -1.63
BDF1P35817 GIN4YDR507C 3429 nt4.85□□□□□ -1.63
BDF1P35817 ISA1YLL027W 753 nt4.85□□□□□ -1.63
BDF1P35817 MET4YNL103W 2019 nt4.85□□□□□ -1.63
BDF1P35817 YDL176WYDL176W 2127 nt4.85□□□□□ -1.63
BDF1P35817 PSE1YMR308C 3270 nt4.84□□□□□ -1.63
BDF1P35817 FZO1YBR179C 2568 nt4.84□□□□□ -1.63
BDF1P35817 RPL31AYDL075W 342 nt4.84□□□□□ -1.63
BDF1P35817 PHD1YKL043W 1101 nt4.84□□□□□ -1.63
BDF1P35817 DUF1YOL087C 3351 nt4.84□□□□□ -1.64
BDF1P35817 YER039C-AYER039C-A 219 nt4.83□□□□□ -1.64
BDF1P35817 YDR261C-DYDR261C-D 4815 nt4.83□□□□□ -1.64
BDF1P35817 CRT10YOL063C 2874 nt4.83□□□□□ -1.64
BDF1P35817 RPS17BYDR447C 411 nt4.82□□□□□ -1.64
BDF1P35817 ZIP1YDR285W 2628 nt4.82□□□□□ -1.64
BDF1P35817 FIG4YNL325C 2640 nt4.82□□□□□ -1.64
BDF1P35817 JEN1YKL217W 1851 nt4.81□□□□□ -1.64
BDF1P35817 MSH2YOL090W 2895 nt4.81□□□□□ -1.64
BDF1P35817 tK(CUU)CtK(CUU)C 73 nt4.81□□□□□ -1.64
BDF1P35817 tK(CUU)D1tK(CUU)D1 73 nt4.81□□□□□ -1.64
BDF1P35817 tK(CUU)D2tK(CUU)D2 73 nt4.81□□□□□ -1.64
BDF1P35817 tK(CUU)E1tK(CUU)E1 73 nt4.81□□□□□ -1.64
BDF1P35817 tK(CUU)E2tK(CUU)E2 73 nt4.81□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 1066.6 ms