Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.54■□□□□ 0.88
RPA3P35244 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
RPA3P35244 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPA3P35244 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPA3P35244 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPA3P35244 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.54■□□□□ 0.88
RPA3P35244 AC034268.1-201ENST00000441047 882 ntBASIC20.54■□□□□ 0.88
RPA3P35244 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.54■□□□□ 0.88
RPA3P35244 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPA3P35244 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPA3P35244 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPA3P35244 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RPA3P35244 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPA3P35244 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPA3P35244 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPA3P35244 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.53■□□□□ 0.88
RPA3P35244 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPA3P35244 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPA3P35244 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.53■□□□□ 0.88
RPA3P35244 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.53■□□□□ 0.88
RPA3P35244 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.53■□□□□ 0.88
RPA3P35244 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.53■□□□□ 0.88
RPA3P35244 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.53■□□□□ 0.88
RPA3P35244 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RPA3P35244 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
RPA3P35244 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPA3P35244 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPA3P35244 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.53■□□□□ 0.88
RPA3P35244 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPA3P35244 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.53■□□□□ 0.88
RPA3P35244 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPA3P35244 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.53■□□□□ 0.88
RPA3P35244 AL020996.1-203ENST00000536896 2307 ntBASIC20.53■□□□□ 0.88
RPA3P35244 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPA3P35244 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.52■□□□□ 0.88
RPA3P35244 KRT87P-202ENST00000534226 1464 ntBASIC20.52■□□□□ 0.88
RPA3P35244 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.52■□□□□ 0.88
RPA3P35244 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RPA3P35244 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPA3P35244 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPA3P35244 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPA3P35244 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPA3P35244 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
RPA3P35244 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.52■□□□□ 0.88
RPA3P35244 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RPA3P35244 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.52■□□□□ 0.87
RPA3P35244 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.52■□□□□ 0.87
RPA3P35244 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RPA3P35244 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
RPA3P35244 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.51■□□□□ 0.87
RPA3P35244 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 AC116562.4-201ENST00000641316 2276 ntBASIC20.51■□□□□ 0.87
RPA3P35244 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPA3P35244 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.51■□□□□ 0.87
RPA3P35244 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.51■□□□□ 0.87
RPA3P35244 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L2-201ENST00000561772 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.51■□□□□ 0.87
RPA3P35244 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L6-201ENST00000626483 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L1-201ENST00000627662 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L8-201ENST00000629013 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L3-201ENST00000630187 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L7-201ENST00000630678 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 DUX4L5-201ENST00000630834 1275 ntBASIC20.51■□□□□ 0.87
RPA3P35244 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RPA3P35244 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
RPA3P35244 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPA3P35244 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
RPA3P35244 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPA3P35244 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.5■□□□□ 0.87
RPA3P35244 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.5■□□□□ 0.87
RPA3P35244 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 MIR5787-201ENST00000611784 55 ntBASIC20.5■□□□□ 0.87
RPA3P35244 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPA3P35244 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPA3P35244 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
RPA3P35244 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.49■□□□□ 0.87
RPA3P35244 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.49■□□□□ 0.87
RPA3P35244 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPA3P35244 AC092720.2-201ENST00000602388 1665 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms