Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA6P31267 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 UNC93B2-201ENST00000285383 730 ntBASIC20.28■□□□□ 0.84
HOXA6P31267 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXA6P31267 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA6P31267 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA6P31267 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA6P31267 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA6P31267 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HOXA6P31267 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA6P31267 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA6P31267 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HOXA6P31267 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA6P31267 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HOXA6P31267 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA6P31267 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA6P31267 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA6P31267 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA6P31267 AC079598.2-202ENST00000546624 1451 ntBASIC20.27■□□□□ 0.84
HOXA6P31267 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HOXA6P31267 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HOXA6P31267 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXA6P31267 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXA6P31267 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.27■□□□□ 0.84
HOXA6P31267 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.27■□□□□ 0.84
HOXA6P31267 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HOXA6P31267 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA6P31267 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA6P31267 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA6P31267 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA6P31267 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA6P31267 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA6P31267 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA6P31267 AC005521.1-201ENST00000393351 872 ntBASIC20.26■□□□□ 0.83
HOXA6P31267 AC113347.1-201ENST00000413321 391 ntBASIC20.26■□□□□ 0.83
HOXA6P31267 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA6P31267 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA6P31267 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXA6P31267 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA6P31267 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HOXA6P31267 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HOXA6P31267 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA6P31267 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
HOXA6P31267 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA6P31267 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA6P31267 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA6P31267 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXA6P31267 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HOXA6P31267 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.25■□□□□ 0.83
HOXA6P31267 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXA6P31267 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
HOXA6P31267 AC004264.1-201ENST00000608354 794 ntBASIC20.25■□□□□ 0.83
HOXA6P31267 REXO1L10P-201ENST00000615707 1290 ntBASIC20.25■□□□□ 0.83
HOXA6P31267 AL121906.2-201ENST00000621597 723 ntBASIC20.25■□□□□ 0.83
HOXA6P31267 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HOXA6P31267 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA6P31267 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HOXA6P31267 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA6P31267 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXA6P31267 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXA6P31267 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HOXA6P31267 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA6P31267 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HOXA6P31267 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA6P31267 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA6P31267 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXA6P31267 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXA6P31267 AL031963.3-201ENST00000606441 850 ntBASIC20.24■□□□□ 0.83
HOXA6P31267 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA6P31267 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA6P31267 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
HOXA6P31267 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
HOXA6P31267 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA6P31267 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA6P31267 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HOXA6P31267 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.23■□□□□ 0.83
HOXA6P31267 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA6P31267 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
HOXA6P31267 AC116562.2-201ENST00000507042 360 ntBASIC20.23■□□□□ 0.83
HOXA6P31267 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.23■□□□□ 0.83
HOXA6P31267 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HOXA6P31267 KRT8P9-201ENST00000558927 1449 ntBASIC20.23■□□□□ 0.83
HOXA6P31267 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA6P31267 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA6P31267 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA6P31267 KRT18P22-201ENST00000402024 1347 ntBASIC20.23■□□□□ 0.83
HOXA6P31267 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXA6P31267 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXA6P31267 LINC01568-207ENST00000641790 1380 ntBASIC20.22■□□□□ 0.83
HOXA6P31267 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
HOXA6P31267 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms