Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD40P25942 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD40P25942 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD40P25942 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.6■□□□□ 0.41
CD40P25942 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD40P25942 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.6■□□□□ 0.41
CD40P25942 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CD40P25942 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CD40P25942 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CD40P25942 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.59■□□□□ 0.41
CD40P25942 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.59■□□□□ 0.41
CD40P25942 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CD40P25942 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 PRORSD1P-201ENST00000295112 541 ntBASIC17.59■□□□□ 0.41
CD40P25942 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.59■□□□□ 0.41
CD40P25942 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.59■□□□□ 0.41
CD40P25942 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CD40P25942 UNC93B4-201ENST00000505679 747 ntBASIC17.59■□□□□ 0.41
CD40P25942 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.59■□□□□ 0.41
CD40P25942 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.59■□□□□ 0.41
CD40P25942 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD40P25942 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CD40P25942 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CD40P25942 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CD40P25942 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.58■□□□□ 0.4
CD40P25942 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CD40P25942 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.58■□□□□ 0.4
CD40P25942 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CD40P25942 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.58■□□□□ 0.4
CD40P25942 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.58■□□□□ 0.4
CD40P25942 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.58■□□□□ 0.4
CD40P25942 AC008687.6-201ENST00000596318 630 ntBASIC17.58■□□□□ 0.4
CD40P25942 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.58■□□□□ 0.4
CD40P25942 MIR2861-201ENST00000636310 90 ntBASIC17.58■□□□□ 0.4
CD40P25942 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CD40P25942 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD40P25942 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CD40P25942 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.57■□□□□ 0.4
CD40P25942 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CD40P25942 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.57■□□□□ 0.4
CD40P25942 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CD40P25942 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD40P25942 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CD40P25942 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.57■□□□□ 0.4
CD40P25942 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD40P25942 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.57■□□□□ 0.4
CD40P25942 AC128676.1-201ENST00000454392 318 ntBASIC17.57■□□□□ 0.4
CD40P25942 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.57■□□□□ 0.4
CD40P25942 AC008403.3-201ENST00000598924 454 ntBASIC17.57■□□□□ 0.4
CD40P25942 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD40P25942 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CD40P25942 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD40P25942 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.57■□□□□ 0.4
CD40P25942 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.56■□□□□ 0.4
CD40P25942 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CD40P25942 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 AF106564.1-201ENST00000607058 2553 ntBASIC17.56■□□□□ 0.4
CD40P25942 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CD40P25942 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CD40P25942 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CD40P25942 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.56■□□□□ 0.4
CD40P25942 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SOX15-203ENST00000570788 1093 ntBASIC17.56■□□□□ 0.4
CD40P25942 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CD40P25942 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD40P25942 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CD40P25942 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms