Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.11■□□□□ 0.33
LMO1P25800 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 AC092720.2-201ENST00000602388 1665 ntBASIC17.1■□□□□ 0.33
LMO1P25800 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.1■□□□□ 0.33
LMO1P25800 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 AC007322.4-201ENST00000509611 723 ntBASIC17.1■□□□□ 0.33
LMO1P25800 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 AL591742.1-201ENST00000604433 565 ntBASIC17.1■□□□□ 0.33
LMO1P25800 FAM21FP-204ENST00000608637 956 ntBASIC17.1■□□□□ 0.33
LMO1P25800 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.1■□□□□ 0.33
LMO1P25800 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
LMO1P25800 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO1P25800 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO1P25800 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO1P25800 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.09■□□□□ 0.33
LMO1P25800 AC137761.2-201ENST00000561729 223 ntBASIC17.09■□□□□ 0.33
LMO1P25800 AC145350.3-201ENST00000569033 163 ntBASIC17.09■□□□□ 0.33
LMO1P25800 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO1P25800 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.09■□□□□ 0.33
LMO1P25800 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO1P25800 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LMO1P25800 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO1P25800 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LMO1P25800 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO1P25800 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.09■□□□□ 0.33
LMO1P25800 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LMO1P25800 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.08■□□□□ 0.33
LMO1P25800 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.08■□□□□ 0.33
LMO1P25800 AL020996.1-203ENST00000536896 2307 ntBASIC17.08■□□□□ 0.33
LMO1P25800 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMO1P25800 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.08■□□□□ 0.33
LMO1P25800 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LMO1P25800 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LMO1P25800 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LMO1P25800 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
LMO1P25800 KRT8P36-201ENST00000489121 1440 ntBASIC17.08■□□□□ 0.32
LMO1P25800 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.08■□□□□ 0.32
LMO1P25800 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LMO1P25800 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.08■□□□□ 0.32
LMO1P25800 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.08■□□□□ 0.32
LMO1P25800 AC013268.1-206ENST00000638368 961 ntBASIC17.08■□□□□ 0.32
LMO1P25800 AC112229.1-201ENST00000639295 961 ntBASIC17.08■□□□□ 0.32
LMO1P25800 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.08■□□□□ 0.32
LMO1P25800 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.08■□□□□ 0.32
LMO1P25800 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.08■□□□□ 0.32
LMO1P25800 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LMO1P25800 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.08■□□□□ 0.32
LMO1P25800 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO1P25800 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LMO1P25800 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.07■□□□□ 0.32
LMO1P25800 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO1P25800 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LMO1P25800 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 AC006015.1-201ENST00000429970 570 ntBASIC17.07■□□□□ 0.32
LMO1P25800 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.07■□□□□ 0.32
LMO1P25800 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.07■□□□□ 0.32
LMO1P25800 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LMO1P25800 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO1P25800 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms