Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 KRT8P36-201ENST00000489121 1440 ntBASIC20.56■□□□□ 0.88
HLA-DPA1P20036 CDCA4P2-201ENST00000441182 718 ntBASIC20.56■□□□□ 0.88
HLA-DPA1P20036 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 OR10C1-204ENST00000622521 1039 ntBASIC20.56■□□□□ 0.88
HLA-DPA1P20036 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DPA1P20036 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 AL157384.1-201ENST00000445995 2473 ntBASIC20.55■□□□□ 0.88
HLA-DPA1P20036 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DPA1P20036 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 MCRIP2P1-201ENST00000394346 511 ntBASIC20.54■□□□□ 0.88
HLA-DPA1P20036 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 AC026185.1-201ENST00000445748 174 ntBASIC20.54■□□□□ 0.88
HLA-DPA1P20036 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 LINC01521-201ENST00000504184 1943 ntBASIC20.54■□□□□ 0.88
HLA-DPA1P20036 AC020907.5-201ENST00000624372 1936 ntBASIC20.54■□□□□ 0.88
HLA-DPA1P20036 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DPA1P20036 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 RAP2CP1-201ENST00000605103 478 ntBASIC20.53■□□□□ 0.88
HLA-DPA1P20036 AL356652.1-201ENST00000615962 565 ntBASIC20.53■□□□□ 0.88
HLA-DPA1P20036 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 AC092720.2-201ENST00000602388 1665 ntBASIC20.53■□□□□ 0.88
HLA-DPA1P20036 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HLA-DPA1P20036 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
HLA-DPA1P20036 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.52■□□□□ 0.87
HLA-DPA1P20036 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HLA-DPA1P20036 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DPA1P20036 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
HLA-DPA1P20036 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DPA1P20036 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HLA-DPA1P20036 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms