Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VCANP13611 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VCANP13611 AC116407.4-201ENST00000623319 1061 ntBASIC21.25■□□□□ 0.99
VCANP13611 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCANP13611 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCANP13611 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCANP13611 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCANP13611 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
VCANP13611 AC137767.1-201ENST00000602918 1920 ntBASIC21.25■□□□□ 0.99
VCANP13611 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.25■□□□□ 0.99
VCANP13611 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.25■□□□□ 0.99
VCANP13611 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
VCANP13611 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCANP13611 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCANP13611 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.25■□□□□ 0.99
VCANP13611 PCED1CP-201ENST00000419887 785 ntBASIC21.25■□□□□ 0.99
VCANP13611 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
VCANP13611 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.25■□□□□ 0.99
VCANP13611 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VCANP13611 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.24■□□□□ 0.99
VCANP13611 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.24■□□□□ 0.99
VCANP13611 AC069148.1-201ENST00000608741 768 ntBASIC21.24■□□□□ 0.99
VCANP13611 C11orf96-202ENST00000528572 1834 ntBASIC21.24■□□□□ 0.99
VCANP13611 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCANP13611 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCANP13611 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VCANP13611 TSPY14P-201ENST00000303979 915 ntBASIC21.24■□□□□ 0.99
VCANP13611 AC116562.2-201ENST00000507042 360 ntBASIC21.24■□□□□ 0.99
VCANP13611 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.24■□□□□ 0.99
VCANP13611 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VCANP13611 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCANP13611 KRT8P45-201ENST00000414328 1447 ntBASIC21.24■□□□□ 0.99
VCANP13611 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCANP13611 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.23■□□□□ 0.99
VCANP13611 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
VCANP13611 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.23■□□□□ 0.99
VCANP13611 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.23■□□□□ 0.99
VCANP13611 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VCANP13611 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.23■□□□□ 0.99
VCANP13611 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.23■□□□□ 0.99
VCANP13611 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCANP13611 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VCANP13611 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.22■□□□□ 0.99
VCANP13611 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCANP13611 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VCANP13611 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.22■□□□□ 0.99
VCANP13611 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
VCANP13611 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCANP13611 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.22■□□□□ 0.99
VCANP13611 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCANP13611 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
VCANP13611 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.22■□□□□ 0.99
VCANP13611 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VCANP13611 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.21■□□□□ 0.99
VCANP13611 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCANP13611 LINC01124-201ENST00000409786 2117 ntBASIC21.21■□□□□ 0.99
VCANP13611 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCANP13611 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCANP13611 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
VCANP13611 AL359075.1-203ENST00000462729 1002 ntBASIC21.2■□□□□ 0.99
VCANP13611 YBX1P2-201ENST00000489612 999 ntBASIC21.2■□□□□ 0.99
VCANP13611 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.2■□□□□ 0.99
VCANP13611 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.2■□□□□ 0.99
VCANP13611 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.2■□□□□ 0.99
VCANP13611 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.2■□□□□ 0.98
VCANP13611 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.2■□□□□ 0.98
VCANP13611 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VCANP13611 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 AP003733.4-201ENST00000623785 1697 ntBASIC21.2■□□□□ 0.98
VCANP13611 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VCANP13611 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VCANP13611 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VCANP13611 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VCANP13611 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VCANP13611 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.19■□□□□ 0.98
VCANP13611 AC008622.2-201ENST00000617006 1229 ntBASIC21.19■□□□□ 0.98
VCANP13611 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
VCANP13611 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
VCANP13611 IER3-202ENST00000376377 1350 ntBASIC21.19■□□□□ 0.98
VCANP13611 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
VCANP13611 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VCANP13611 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
VCANP13611 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VCANP13611 AC092183.1-201ENST00000469884 875 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms