Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 CDV3P1-201ENST00000471403 739 ntBASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 AC099778.1-201ENST00000568593 1911 ntBASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HNRNPCL4P0DMR1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
HNRNPCL4P0DMR1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HNRNPCL4P0DMR1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HNRNPCL4P0DMR1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 UBE2DNL-204ENST00000602536 740 ntBASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 FAM21FP-204ENST00000608637 956 ntBASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 KRT8P36-201ENST00000489121 1440 ntBASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HNRNPCL4P0DMR1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 KRT18P61-201ENST00000585825 1298 ntBASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 AL391422.3-201ENST00000603791 2761 ntBASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HNRNPCL4P0DMR1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 MYCNOS-205ENST00000641950 531 ntBASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HNRNPCL4P0DMR1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HNRNPCL4P0DMR1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
HNRNPCL4P0DMR1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms