Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
HMGCRP04035 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
HMGCRP04035 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGCRP04035 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGCRP04035 AC092865.7-201ENST00000641832 219 ntBASIC23.12■■□□□ 1.29
HMGCRP04035 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGCRP04035 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.12■■□□□ 1.29
HMGCRP04035 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCRP04035 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.11■■□□□ 1.29
HMGCRP04035 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.11■■□□□ 1.29
HMGCRP04035 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.11■■□□□ 1.29
HMGCRP04035 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.11■■□□□ 1.29
HMGCRP04035 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 AF186192.3-201ENST00000583427 947 ntBASIC23.11■■□□□ 1.29
HMGCRP04035 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
HMGCRP04035 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCRP04035 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCRP04035 GUSBP5-202ENST00000510805 1989 ntBASIC23.1■■□□□ 1.29
HMGCRP04035 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGCRP04035 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCRP04035 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.1■■□□□ 1.29
HMGCRP04035 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGCRP04035 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.1■■□□□ 1.29
HMGCRP04035 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCRP04035 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.1■■□□□ 1.29
HMGCRP04035 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCRP04035 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
HMGCRP04035 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCRP04035 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGCRP04035 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCRP04035 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
HMGCRP04035 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.09■■□□□ 1.29
HMGCRP04035 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.09■■□□□ 1.29
HMGCRP04035 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.09■■□□□ 1.29
HMGCRP04035 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.09■■□□□ 1.29
HMGCRP04035 AC145285.6-201ENST00000604632 637 ntBASIC23.09■■□□□ 1.29
HMGCRP04035 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.09■■□□□ 1.29
HMGCRP04035 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.09■■□□□ 1.29
HMGCRP04035 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HMGCRP04035 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
HMGCRP04035 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 AL353807.1-201ENST00000427475 662 ntBASIC23.08■■□□□ 1.29
HMGCRP04035 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.08■■□□□ 1.29
HMGCRP04035 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.08■■□□□ 1.29
HMGCRP04035 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 AL356652.1-201ENST00000615962 565 ntBASIC23.08■■□□□ 1.29
HMGCRP04035 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HMGCRP04035 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.08■■□□□ 1.29
HMGCRP04035 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.08■■□□□ 1.29
HMGCRP04035 AL117328.2-201ENST00000624617 1940 ntBASIC23.08■■□□□ 1.28
HMGCRP04035 AC242852.2-201ENST00000615738 1807 ntBASIC23.08■■□□□ 1.28
HMGCRP04035 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HMGCRP04035 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HMGCRP04035 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
HMGCRP04035 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.08■■□□□ 1.28
HMGCRP04035 HTR7P1-201ENST00000538670 1336 ntBASIC23.08■■□□□ 1.28
HMGCRP04035 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCRP04035 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCRP04035 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCRP04035 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
HMGCRP04035 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
HMGCRP04035 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.07■■□□□ 1.28
HMGCRP04035 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCRP04035 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.07■■□□□ 1.28
HMGCRP04035 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.07■■□□□ 1.28
HMGCRP04035 MIR6786-201ENST00000616843 113 ntBASIC23.07■■□□□ 1.28
HMGCRP04035 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms