Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HLA-AP01891 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HLA-AP01891 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-AP01891 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-AP01891 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-AP01891 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-AP01891 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-AP01891 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-AP01891 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
HLA-AP01891 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-AP01891 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-AP01891 AC008406.3-201ENST00000620001 1374 ntBASIC17.15■□□□□ 0.34
HLA-AP01891 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.14■□□□□ 0.34
HLA-AP01891 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-AP01891 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 AC120498.9-201ENST00000339021 3867 ntBASIC17.14■□□□□ 0.33
HLA-AP01891 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HLA-AP01891 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HLA-AP01891 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HLA-AP01891 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-AP01891 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-AP01891 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-AP01891 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-AP01891 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-AP01891 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HLA-AP01891 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HLA-AP01891 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-AP01891 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HLA-AP01891 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-AP01891 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HLA-AP01891 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
HLA-AP01891 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HLA-AP01891 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HLA-AP01891 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-AP01891 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 AC125437.2-201ENST00000625180 2167 ntBASIC17.13■□□□□ 0.33
HLA-AP01891 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HLA-AP01891 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
HLA-AP01891 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 AC092720.2-201ENST00000602388 1665 ntBASIC17.13■□□□□ 0.33
HLA-AP01891 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-AP01891 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-AP01891 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HLA-AP01891 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-AP01891 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HLA-AP01891 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-AP01891 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-AP01891 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-AP01891 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-AP01891 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-AP01891 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-AP01891 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HLA-AP01891 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-AP01891 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-AP01891 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-AP01891 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-AP01891 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-AP01891 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HLA-AP01891 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-AP01891 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-AP01891 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms