Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP3BO95985 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.8■□□□□ 0.92
TOP3BO95985 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP3BO95985 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.8■□□□□ 0.92
TOP3BO95985 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP3BO95985 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP3BO95985 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TOP3BO95985 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.79■□□□□ 0.92
TOP3BO95985 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.79■□□□□ 0.92
TOP3BO95985 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TOP3BO95985 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TOP3BO95985 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TOP3BO95985 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.79■□□□□ 0.92
TOP3BO95985 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TOP3BO95985 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TOP3BO95985 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.79■□□□□ 0.92
TOP3BO95985 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP3BO95985 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP3BO95985 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TOP3BO95985 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.78■□□□□ 0.92
TOP3BO95985 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.78■□□□□ 0.92
TOP3BO95985 AC093787.1-201ENST00000450396 207 ntBASIC20.78■□□□□ 0.92
TOP3BO95985 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
TOP3BO95985 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.78■□□□□ 0.92
TOP3BO95985 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP3BO95985 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP3BO95985 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP3BO95985 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP3BO95985 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP3BO95985 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TOP3BO95985 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TOP3BO95985 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
TOP3BO95985 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
TOP3BO95985 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.77■□□□□ 0.92
TOP3BO95985 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.77■□□□□ 0.92
TOP3BO95985 CYP2T1P-201ENST00000432607 1285 ntBASIC20.77■□□□□ 0.92
TOP3BO95985 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TOP3BO95985 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.77■□□□□ 0.92
TOP3BO95985 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.77■□□□□ 0.92
TOP3BO95985 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP3BO95985 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP3BO95985 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP3BO95985 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.77■□□□□ 0.92
TOP3BO95985 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP3BO95985 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
TOP3BO95985 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TOP3BO95985 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.77■□□□□ 0.91
TOP3BO95985 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TOP3BO95985 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
TOP3BO95985 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.76■□□□□ 0.91
TOP3BO95985 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TOP3BO95985 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.76■□□□□ 0.91
TOP3BO95985 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP3BO95985 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP3BO95985 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.76■□□□□ 0.91
TOP3BO95985 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP3BO95985 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.76■□□□□ 0.91
TOP3BO95985 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.76■□□□□ 0.91
TOP3BO95985 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 AC068338.2-201ENST00000563278 1430 ntBASIC20.76■□□□□ 0.91
TOP3BO95985 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms