Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.43■□□□□ 0.86
RFPL1O75677 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.43■□□□□ 0.86
RFPL1O75677 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RFPL1O75677 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFPL1O75677 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 POU5F1P4-201ENST00000413175 1085 ntBASIC20.42■□□□□ 0.86
RFPL1O75677 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.42■□□□□ 0.86
RFPL1O75677 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
RFPL1O75677 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.42■□□□□ 0.86
RFPL1O75677 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.42■□□□□ 0.86
RFPL1O75677 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFPL1O75677 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.41■□□□□ 0.86
RFPL1O75677 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.41■□□□□ 0.86
RFPL1O75677 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.41■□□□□ 0.86
RFPL1O75677 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.41■□□□□ 0.86
RFPL1O75677 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 AC008175.2-201ENST00000612840 297 ntBASIC20.41■□□□□ 0.86
RFPL1O75677 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RFPL1O75677 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.41■□□□□ 0.86
RFPL1O75677 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
RFPL1O75677 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFPL1O75677 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RFPL1O75677 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.41■□□□□ 0.86
RFPL1O75677 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFPL1O75677 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RFPL1O75677 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFPL1O75677 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RFPL1O75677 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.4■□□□□ 0.86
RFPL1O75677 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.4■□□□□ 0.86
RFPL1O75677 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.4■□□□□ 0.86
RFPL1O75677 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.4■□□□□ 0.86
RFPL1O75677 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.4■□□□□ 0.86
RFPL1O75677 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFPL1O75677 KRT18P61-201ENST00000585825 1298 ntBASIC20.4■□□□□ 0.86
RFPL1O75677 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.4■□□□□ 0.86
RFPL1O75677 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFPL1O75677 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RFPL1O75677 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
RFPL1O75677 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.39■□□□□ 0.86
RFPL1O75677 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL1O75677 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL1O75677 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL1O75677 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL1O75677 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL1O75677 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RFPL1O75677 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.39■□□□□ 0.85
RFPL1O75677 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.39■□□□□ 0.85
RFPL1O75677 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.39■□□□□ 0.85
RFPL1O75677 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.39■□□□□ 0.85
RFPL1O75677 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RFPL1O75677 AC073111.5-205ENST00000641717 521 ntBASIC20.39■□□□□ 0.85
RFPL1O75677 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.39■□□□□ 0.85
RFPL1O75677 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RFPL1O75677 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RFPL1O75677 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.39■□□□□ 0.85
RFPL1O75677 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFPL1O75677 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL1O75677 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.38■□□□□ 0.85
RFPL1O75677 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.38■□□□□ 0.85
RFPL1O75677 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.38■□□□□ 0.85
RFPL1O75677 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL1O75677 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFPL1O75677 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms