Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.3■□□□□ 0.84
NDUFS3O75489 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.3■□□□□ 0.84
NDUFS3O75489 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.3■□□□□ 0.84
NDUFS3O75489 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS3O75489 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.3■□□□□ 0.84
NDUFS3O75489 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDUFS3O75489 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS3O75489 AC092720.2-201ENST00000602388 1665 ntBASIC20.29■□□□□ 0.84
NDUFS3O75489 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS3O75489 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
NDUFS3O75489 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NDUFS3O75489 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NDUFS3O75489 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS3O75489 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS3O75489 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS3O75489 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS3O75489 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS3O75489 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NDUFS3O75489 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS3O75489 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.28■□□□□ 0.84
NDUFS3O75489 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.28■□□□□ 0.84
NDUFS3O75489 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NDUFS3O75489 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.28■□□□□ 0.84
NDUFS3O75489 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NDUFS3O75489 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 AL162412.1-201ENST00000567129 965 ntBASIC20.28■□□□□ 0.84
NDUFS3O75489 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.28■□□□□ 0.84
NDUFS3O75489 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NDUFS3O75489 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS3O75489 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.28■□□□□ 0.84
NDUFS3O75489 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFS3O75489 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.27■□□□□ 0.84
NDUFS3O75489 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
NDUFS3O75489 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.27■□□□□ 0.84
NDUFS3O75489 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
NDUFS3O75489 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.27■□□□□ 0.84
NDUFS3O75489 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.27■□□□□ 0.84
NDUFS3O75489 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.27■□□□□ 0.84
NDUFS3O75489 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.27■□□□□ 0.84
NDUFS3O75489 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.27■□□□□ 0.84
NDUFS3O75489 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NDUFS3O75489 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.27■□□□□ 0.84
NDUFS3O75489 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFS3O75489 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NDUFS3O75489 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.27■□□□□ 0.83
NDUFS3O75489 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFS3O75489 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFS3O75489 CNN2P6-201ENST00000439038 900 ntBASIC20.26■□□□□ 0.83
NDUFS3O75489 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.26■□□□□ 0.83
NDUFS3O75489 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.26■□□□□ 0.83
NDUFS3O75489 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.26■□□□□ 0.83
NDUFS3O75489 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.26■□□□□ 0.83
NDUFS3O75489 AC016405.3-201ENST00000607710 860 ntBASIC20.26■□□□□ 0.83
NDUFS3O75489 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NDUFS3O75489 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NDUFS3O75489 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFS3O75489 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFS3O75489 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFS3O75489 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NDUFS3O75489 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NDUFS3O75489 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.25■□□□□ 0.83
NDUFS3O75489 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.25■□□□□ 0.83
NDUFS3O75489 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms