Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN3O60637 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN3O60637 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN3O60637 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.95
TSPAN3O60637 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN3O60637 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TSPAN3O60637 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.01■□□□□ 0.95
TSPAN3O60637 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.01■□□□□ 0.95
TSPAN3O60637 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
TSPAN3O60637 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.01■□□□□ 0.95
TSPAN3O60637 C2orf69P4-201ENST00000565394 541 ntBASIC21.01■□□□□ 0.95
TSPAN3O60637 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN3O60637 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN3O60637 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21■□□□□ 0.95
TSPAN3O60637 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN3O60637 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN3O60637 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN3O60637 ESRRAP1-201ENST00000400596 1257 ntBASIC21■□□□□ 0.95
TSPAN3O60637 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TSPAN3O60637 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
TSPAN3O60637 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21■□□□□ 0.95
TSPAN3O60637 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TSPAN3O60637 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21■□□□□ 0.95
TSPAN3O60637 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21■□□□□ 0.95
TSPAN3O60637 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
TSPAN3O60637 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TSPAN3O60637 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.99■□□□□ 0.95
TSPAN3O60637 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.99■□□□□ 0.95
TSPAN3O60637 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.99■□□□□ 0.95
TSPAN3O60637 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TSPAN3O60637 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.99■□□□□ 0.95
TSPAN3O60637 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TSPAN3O60637 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN3O60637 CLDN5-201ENST00000403084 2357 ntBASIC20.99■□□□□ 0.95
TSPAN3O60637 AC092368.3-202ENST00000574180 1591 ntBASIC20.98■□□□□ 0.95
TSPAN3O60637 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN3O60637 AL137060.1-201ENST00000618151 2648 ntBASIC20.98■□□□□ 0.95
TSPAN3O60637 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TSPAN3O60637 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN3O60637 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.98■□□□□ 0.95
TSPAN3O60637 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.98■□□□□ 0.95
TSPAN3O60637 AC060766.5-201ENST00000590539 871 ntBASIC20.98■□□□□ 0.95
TSPAN3O60637 MIR2861-201ENST00000636310 90 ntBASIC20.98■□□□□ 0.95
TSPAN3O60637 HLA-B-256ENST00000639848 1089 ntBASIC20.98■□□□□ 0.95
TSPAN3O60637 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TSPAN3O60637 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN3O60637 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN3O60637 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN3O60637 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TSPAN3O60637 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN3O60637 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
TSPAN3O60637 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TSPAN3O60637 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.97■□□□□ 0.95
TSPAN3O60637 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TSPAN3O60637 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TSPAN3O60637 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.97■□□□□ 0.95
TSPAN3O60637 UNC93B5-201ENST00000530315 699 ntBASIC20.97■□□□□ 0.95
TSPAN3O60637 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TSPAN3O60637 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 AC066615.1-201ENST00000640911 628 ntBASIC20.97■□□□□ 0.95
TSPAN3O60637 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TSPAN3O60637 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN3O60637 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.97■□□□□ 0.95
TSPAN3O60637 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN3O60637 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TSPAN3O60637 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN3O60637 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.96■□□□□ 0.95
TSPAN3O60637 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN3O60637 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN3O60637 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN3O60637 KRT18P29-201ENST00000397031 1267 ntBASIC20.96■□□□□ 0.95
TSPAN3O60637 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN3O60637 PNMA6B-201ENST00000538162 1200 ntBASIC20.96■□□□□ 0.95
TSPAN3O60637 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.96■□□□□ 0.95
TSPAN3O60637 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN3O60637 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN3O60637 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TSPAN3O60637 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN3O60637 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms