Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AL109923.1-201ENST00000618799 583 ntBASIC23.16■■□□□ 1.3
CCNT1O60563 KRT17P1-201ENST00000399211 1546 ntBASIC23.16■■□□□ 1.3
CCNT1O60563 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.16■■□□□ 1.3
CCNT1O60563 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CCNT1O60563 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.16■■□□□ 1.3
CCNT1O60563 AL157384.1-201ENST00000445995 2473 ntBASIC23.16■■□□□ 1.3
CCNT1O60563 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CCNT1O60563 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNT1O60563 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNT1O60563 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNT1O60563 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCNT1O60563 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
CCNT1O60563 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CCNT1O60563 BX276092.2-201ENST00000417668 665 ntBASIC23.15■■□□□ 1.3
CCNT1O60563 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNT1O60563 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNT1O60563 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.15■■□□□ 1.3
CCNT1O60563 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.15■■□□□ 1.3
CCNT1O60563 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNT1O60563 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNT1O60563 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNT1O60563 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNT1O60563 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.14■■□□□ 1.3
CCNT1O60563 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCNT1O60563 FEM1AP1-201ENST00000431297 1995 ntBASIC23.14■■□□□ 1.3
CCNT1O60563 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCNT1O60563 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.14■■□□□ 1.29
CCNT1O60563 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNT1O60563 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNT1O60563 MIPEPP3-201ENST00000412105 444 ntBASIC23.14■■□□□ 1.29
CCNT1O60563 AC104771.1-201ENST00000603335 964 ntBASIC23.14■■□□□ 1.29
CCNT1O60563 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNT1O60563 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNT1O60563 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNT1O60563 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNT1O60563 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CCNT1O60563 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNT1O60563 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNT1O60563 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.13■■□□□ 1.29
CCNT1O60563 AC073314.1-201ENST00000568729 2216 ntBASIC23.13■■□□□ 1.29
CCNT1O60563 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
CCNT1O60563 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CCNT1O60563 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.13■■□□□ 1.29
CCNT1O60563 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCNT1O60563 HLA-L-209ENST00000420110 1011 ntBASIC23.13■■□□□ 1.29
CCNT1O60563 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.13■■□□□ 1.29
CCNT1O60563 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.13■■□□□ 1.29
CCNT1O60563 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNT1O60563 AC105020.6-201ENST00000621523 1217 ntBASIC23.13■■□□□ 1.29
CCNT1O60563 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCNT1O60563 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CCNT1O60563 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.12■■□□□ 1.29
CCNT1O60563 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCNT1O60563 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCNT1O60563 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.12■■□□□ 1.29
CCNT1O60563 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.12■■□□□ 1.29
CCNT1O60563 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.12■■□□□ 1.29
CCNT1O60563 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.12■■□□□ 1.29
CCNT1O60563 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CCNT1O60563 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.12■■□□□ 1.29
CCNT1O60563 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.12■■□□□ 1.29
CCNT1O60563 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.12■■□□□ 1.29
CCNT1O60563 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNT1O60563 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CCNT1O60563 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CCNT1O60563 LSM12P1-201ENST00000411836 588 ntBASIC23.11■■□□□ 1.29
CCNT1O60563 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.11■■□□□ 1.29
CCNT1O60563 AL589743.5-201ENST00000616611 1050 ntBASIC23.11■■□□□ 1.29
CCNT1O60563 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.11■■□□□ 1.29
CCNT1O60563 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CCNT1O60563 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNT1O60563 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CCNT1O60563 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNT1O60563 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNT1O60563 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNT1O60563 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNT1O60563 ID1-201ENST00000376105 1233 ntBASIC23.1■■□□□ 1.29
CCNT1O60563 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
CCNT1O60563 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.1■■□□□ 1.29
CCNT1O60563 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNT1O60563 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CCNT1O60563 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms