Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SNAI2O43623 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.17■□□□□ 0.02
SNAI2O43623 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SNAI2O43623 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SNAI2O43623 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.17■□□□□ 0.02
SNAI2O43623 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.17■□□□□ 0.02
SNAI2O43623 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.16■□□□□ 0.02
SNAI2O43623 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.16■□□□□ 0.02
SNAI2O43623 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.16■□□□□ 0.02
SNAI2O43623 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 FZD10-202ENST00000539839 3282 ntBASIC15.16■□□□□ 0.02
SNAI2O43623 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.16■□□□□ 0.02
SNAI2O43623 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.16■□□□□ 0.02
SNAI2O43623 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNAI2O43623 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SNAI2O43623 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 LETM1P2-201ENST00000597330 2178 ntBASIC15.15■□□□□ 0.02
SNAI2O43623 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
SNAI2O43623 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNAI2O43623 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.15■□□□□ 0.02
SNAI2O43623 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SNAI2O43623 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
SNAI2O43623 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SNAI2O43623 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 AC009237.3-201ENST00000393279 1427 ntBASIC15.15■□□□□ 0.02
SNAI2O43623 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SNAI2O43623 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.15■□□□□ 0.02
SNAI2O43623 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.15■□□□□ 0.02
SNAI2O43623 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNAI2O43623 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.14■□□□□ 0.01
SNAI2O43623 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 AL512408.1-201ENST00000569378 2000 ntBASIC15.14■□□□□ 0.01
SNAI2O43623 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.14■□□□□ 0.01
SNAI2O43623 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNAI2O43623 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
SNAI2O43623 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 AC098818.2-201ENST00000564925 2320 ntBASIC15.14■□□□□ 0.01
SNAI2O43623 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNAI2O43623 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SNAI2O43623 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.14■□□□□ 0.01
SNAI2O43623 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.14■□□□□ 0.01
SNAI2O43623 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 FP700111.2-201ENST00000619190 1892 ntBASIC15.14■□□□□ 0.01
SNAI2O43623 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.14■□□□□ 0.01
SNAI2O43623 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.14■□□□□ 0.01
SNAI2O43623 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNAI2O43623 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms