Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 LSM12P1-201ENST00000411836 588 ntBASIC18.77■□□□□ 0.6
TO15178 AC142086.2-201ENST00000569753 217 ntBASIC18.77■□□□□ 0.6
TO15178 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.77■□□□□ 0.6
TO15178 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TO15178 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TO15178 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TO15178 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.76■□□□□ 0.59
TO15178 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.76■□□□□ 0.59
TO15178 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TO15178 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TO15178 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.76■□□□□ 0.59
TO15178 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TO15178 HLA-L-209ENST00000420110 1011 ntBASIC18.76■□□□□ 0.59
TO15178 AC073210.2-201ENST00000430369 194 ntBASIC18.76■□□□□ 0.59
TO15178 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.76■□□□□ 0.59
TO15178 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
TO15178 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TO15178 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TO15178 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.76■□□□□ 0.59
TO15178 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TO15178 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TO15178 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TO15178 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.75■□□□□ 0.59
TO15178 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.75■□□□□ 0.59
TO15178 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TO15178 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.75■□□□□ 0.59
TO15178 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 MIR4758-201ENST00000577688 71 ntBASIC18.75■□□□□ 0.59
TO15178 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TO15178 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
TO15178 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TO15178 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TO15178 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.74■□□□□ 0.59
TO15178 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TO15178 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TO15178 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
TO15178 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TO15178 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TO15178 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TO15178 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.74■□□□□ 0.59
TO15178 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.74■□□□□ 0.59
TO15178 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.74■□□□□ 0.59
TO15178 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TO15178 PKD1P6-201ENST00000343738 4769 ntBASIC18.74■□□□□ 0.59
TO15178 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.74■□□□□ 0.59
TO15178 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TO15178 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.74■□□□□ 0.59
TO15178 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TO15178 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.73■□□□□ 0.59
TO15178 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TO15178 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TO15178 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TO15178 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.73■□□□□ 0.59
TO15178 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TO15178 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.73■□□□□ 0.59
TO15178 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TO15178 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TO15178 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.73■□□□□ 0.59
TO15178 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.73■□□□□ 0.59
TO15178 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.73■□□□□ 0.59
TO15178 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TO15178 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.73■□□□□ 0.59
TO15178 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms