Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3D1O14617 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
AP3D1O14617 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.98■□□□□ 0.63
AP3D1O14617 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3D1O14617 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3D1O14617 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.98■□□□□ 0.63
AP3D1O14617 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3D1O14617 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
AP3D1O14617 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3D1O14617 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 AC027702.1-201ENST00000563810 1770 ntBASIC18.97■□□□□ 0.63
AP3D1O14617 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3D1O14617 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.97■□□□□ 0.63
AP3D1O14617 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3D1O14617 MIR6821-201ENST00000617625 74 ntBASIC18.97■□□□□ 0.63
AP3D1O14617 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 KRT16P2-201ENST00000414673 1423 ntBASIC18.97■□□□□ 0.63
AP3D1O14617 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3D1O14617 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3D1O14617 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3D1O14617 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
AP3D1O14617 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.96■□□□□ 0.63
AP3D1O14617 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3D1O14617 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.96■□□□□ 0.63
AP3D1O14617 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.96■□□□□ 0.63
AP3D1O14617 RARRES2P11-201ENST00000635158 484 ntBASIC18.96■□□□□ 0.63
AP3D1O14617 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
AP3D1O14617 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 AC019069.1-201ENST00000610008 1333 ntBASIC18.96■□□□□ 0.63
AP3D1O14617 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3D1O14617 AC020907.5-201ENST00000624372 1936 ntBASIC18.96■□□□□ 0.63
AP3D1O14617 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
AP3D1O14617 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.62
AP3D1O14617 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
AP3D1O14617 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
AP3D1O14617 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
AP3D1O14617 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
AP3D1O14617 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
AP3D1O14617 AC245052.3-201ENST00000450182 901 ntBASIC18.95■□□□□ 0.62
AP3D1O14617 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3D1O14617 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3D1O14617 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
AP3D1O14617 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3D1O14617 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
AP3D1O14617 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
AP3D1O14617 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
AP3D1O14617 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3D1O14617 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
AP3D1O14617 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP3D1O14617 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3D1O14617 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
AP3D1O14617 AC034268.1-201ENST00000441047 882 ntBASIC18.94■□□□□ 0.62
AP3D1O14617 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3D1O14617 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3D1O14617 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.94■□□□□ 0.62
AP3D1O14617 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3D1O14617 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3D1O14617 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3D1O14617 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.94■□□□□ 0.62
AP3D1O14617 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3D1O14617 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3D1O14617 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3D1O14617 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3D1O14617 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3D1O14617 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms