Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 ESRRAP1-201ENST00000400596 1257 ntBASIC26.31■■□□□ 1.8
CHL1O00533 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.31■■□□□ 1.8
CHL1O00533 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.31■■□□□ 1.8
CHL1O00533 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.31■■□□□ 1.8
CHL1O00533 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.31■■□□□ 1.8
CHL1O00533 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.31■■□□□ 1.8
CHL1O00533 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHL1O00533 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.3■■□□□ 1.8
CHL1O00533 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.3■■□□□ 1.8
CHL1O00533 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.3■■□□□ 1.8
CHL1O00533 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.3■■□□□ 1.8
CHL1O00533 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.3■■□□□ 1.8
CHL1O00533 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CHL1O00533 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHL1O00533 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CHL1O00533 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHL1O00533 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.29■■□□□ 1.8
CHL1O00533 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHL1O00533 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHL1O00533 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC26.29■■□□□ 1.8
CHL1O00533 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.29■■□□□ 1.8
CHL1O00533 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHL1O00533 AC026366.1-201ENST00000488803 879 ntBASIC26.29■■□□□ 1.8
CHL1O00533 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.29■■□□□ 1.8
CHL1O00533 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.29■■□□□ 1.8
CHL1O00533 FP700111.2-201ENST00000619190 1892 ntBASIC26.29■■□□□ 1.8
CHL1O00533 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.29■■□□□ 1.8
CHL1O00533 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHL1O00533 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHL1O00533 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHL1O00533 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.28■■□□□ 1.8
CHL1O00533 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHL1O00533 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHL1O00533 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHL1O00533 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.28■■□□□ 1.8
CHL1O00533 FAM201B-201ENST00000458407 597 ntBASIC26.28■■□□□ 1.8
CHL1O00533 UNC93B4-201ENST00000505679 747 ntBASIC26.28■■□□□ 1.8
CHL1O00533 TMEM191A-211ENST00000637163 1067 ntBASIC26.28■■□□□ 1.8
CHL1O00533 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHL1O00533 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHL1O00533 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.28■■□□□ 1.8
CHL1O00533 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHL1O00533 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHL1O00533 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHL1O00533 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHL1O00533 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.27■■□□□ 1.8
CHL1O00533 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHL1O00533 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.27■■□□□ 1.8
CHL1O00533 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.27■■□□□ 1.8
CHL1O00533 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.27■■□□□ 1.8
CHL1O00533 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHL1O00533 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CHL1O00533 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.27■■□□□ 1.8
CHL1O00533 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHL1O00533 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CHL1O00533 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CHL1O00533 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.26■■□□□ 1.79
CHL1O00533 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 AP003097.1-201ENST00000530657 1135 ntBASIC26.26■■□□□ 1.79
CHL1O00533 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.26■■□□□ 1.79
CHL1O00533 ITM2C-210ENST00000620962 501 ntBASIC26.26■■□□□ 1.79
CHL1O00533 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHL1O00533 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHL1O00533 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHL1O00533 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.25■■□□□ 1.79
CHL1O00533 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.25■■□□□ 1.79
CHL1O00533 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.25■■□□□ 1.79
CHL1O00533 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CHL1O00533 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CHL1O00533 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHL1O00533 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHL1O00533 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms