Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 AC099778.1-201ENST00000568593 1911 ntBASIC16.41■□□□□ 0.22
SRRM4A7MD48 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM4A7MD48 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SRRM4A7MD48 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.22
SRRM4A7MD48 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRRM4A7MD48 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.39■□□□□ 0.22
SRRM4A7MD48 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRRM4A7MD48 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.39■□□□□ 0.21
SRRM4A7MD48 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 AC026271.2-201ENST00000428091 497 ntBASIC16.39■□□□□ 0.21
SRRM4A7MD48 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.39■□□□□ 0.21
SRRM4A7MD48 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SRRM4A7MD48 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM4A7MD48 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 TERF1P5-201ENST00000477545 1207 ntBASIC16.38■□□□□ 0.21
SRRM4A7MD48 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM4A7MD48 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM4A7MD48 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM4A7MD48 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM4A7MD48 KRT8P36-201ENST00000489121 1440 ntBASIC16.37■□□□□ 0.21
SRRM4A7MD48 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 SMG8-203ENST00000578922 2178 ntBASIC16.37■□□□□ 0.21
SRRM4A7MD48 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 AFG3L1P-217ENST00000557444 2447 ntBASIC16.37■□□□□ 0.21
SRRM4A7MD48 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM4A7MD48 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM4A7MD48 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM4A7MD48 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM4A7MD48 KRT18P5-201ENST00000436075 1291 ntBASIC16.37■□□□□ 0.21
SRRM4A7MD48 CDV3P1-201ENST00000471403 739 ntBASIC16.37■□□□□ 0.21
SRRM4A7MD48 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 AC010536.3-201ENST00000620306 533 ntBASIC16.37■□□□□ 0.21
SRRM4A7MD48 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.37■□□□□ 0.21
SRRM4A7MD48 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms