Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.98■■□□□ 1.43
TMEM88BA6NKF7 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.98■■□□□ 1.43
TMEM88BA6NKF7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TMEM88BA6NKF7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM88BA6NKF7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM88BA6NKF7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM88BA6NKF7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 ECEL1P2-202ENST00000465689 757 ntBASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 C2orf69P3-201ENST00000565542 1120 ntBASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 AC087742.1-201ENST00000575880 1738 ntBASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
TMEM88BA6NKF7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 FAM8A6P-201ENST00000407496 1135 ntBASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 KSR1P1-201ENST00000446298 240 ntBASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
TMEM88BA6NKF7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.95■■□□□ 1.43
TMEM88BA6NKF7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.95■■□□□ 1.43
TMEM88BA6NKF7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.95■■□□□ 1.43
TMEM88BA6NKF7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TMEM88BA6NKF7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM88BA6NKF7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 EGLN1P1-201ENST00000531623 762 ntBASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.94■■□□□ 1.42
TMEM88BA6NKF7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 AL356652.1-201ENST00000615962 565 ntBASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 KRT16P1-201ENST00000399124 1418 ntBASIC23.93■■□□□ 1.42
TMEM88BA6NKF7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM88BA6NKF7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms