Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM49BA6NDI0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
TRIM49BA6NDI0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRIM49BA6NDI0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRIM49BA6NDI0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 KRT18P5-201ENST00000436075 1291 ntBASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM49BA6NDI0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
TRIM49BA6NDI0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 KRT8P36-201ENST00000489121 1440 ntBASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 AC026271.2-201ENST00000428091 497 ntBASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 AC010536.3-201ENST00000620306 533 ntBASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM49BA6NDI0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM49BA6NDI0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 TERF1P5-201ENST00000477545 1207 ntBASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 TCF3P1-201ENST00000423021 1937 ntBASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms