Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 TCF3P1-201ENST00000423021 1937 ntBASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV3A0A0B4J244 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 AC007952.6-201ENST00000573168 2673 ntBASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 AC003957.1-201ENST00000625108 2673 ntBASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 AC091799.1-201ENST00000422823 811 ntBASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 RBM17P2-201ENST00000616397 1405 ntBASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV3A0A0B4J244 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 ZNRF2P3-201ENST00000424200 374 ntBASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 KRT18P20-201ENST00000548986 1279 ntBASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV3A0A0B4J244 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms