Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-2A0A087WT02 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-2A0A087WT02 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-2A0A087WT02 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 MIR4767-201ENST00000582827 78 ntBASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-2A0A087WT02 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 AC006128.1-201ENST00000624704 1661 ntBASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 AC027682.1-201ENST00000562846 899 ntBASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 AL499627.2-201ENST00000606283 725 ntBASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-2A0A087WT02 AC005332.8-201ENST00000622750 2735 ntBASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 AC133637.1-201ENST00000624115 1537 ntBASIC15.08■□□□□ 0.01
TRAV9-2A0A087WT02 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 AC006455.2-201ENST00000429931 906 ntBASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 AC091305.1-201ENST00000479476 895 ntBASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 AC104564.3-201ENST00000582367 638 ntBASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-2A0A087WT02 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 AC233992.3-201ENST00000607491 485 ntBASIC15.07■□□□□ 0
TRAV9-2A0A087WT02 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms