Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 PDCL3P7-201ENST00000392251 712 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 CAPNS1P1-201ENST00000401029 633 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 ARF1P1-201ENST00000406466 544 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 MIR1306-201ENST00000408439 85 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 WRBP1-201ENST00000423352 334 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 SDHDP2-201ENST00000436937 465 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AL392003.2-201ENST00000451015 679 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AC104164.4-201ENST00000483456 493 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 TRIM60P15-201ENST00000509929 712 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 OR4C7P-201ENST00000533375 919 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 COX5AP2-201ENST00000554418 394 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 NR2F2-AS1-207ENST00000560170 547 ntTSL 4 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 OR4C45-201ENST00000568934 921 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 RN7SL847P-201ENST00000582819 270 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 MIR5008-201ENST00000584300 94 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AC022149.1-201ENST00000596032 609 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 MIR3191-201ENST00000636300 76 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 R3HDM2P1-201ENST00000505381 1960 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 PLCE1-AS1-201ENST00000425267 1370 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RNA5SP145-201ENST00000363124 125 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RN7SKP79-201ENST00000363373 336 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 SNORD86-201ENST00000391196 86 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 EIF4A1P8-201ENST00000394444 1190 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RN7SKP136-201ENST00000410927 300 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC018641.1-201ENST00000435950 796 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RN7SL418P-201ENST00000473031 287 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RPL23AP10-201ENST00000489946 466 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RN7SL598P-201ENST00000494391 294 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC106774.1-201ENST00000515105 321 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC138356.2-201ENST00000521192 667 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 IGHVII-30-1-201ENST00000522218 301 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC073913.2-201ENST00000541512 145 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RN7SL246P-201ENST00000584467 296 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC060766.2-201ENST00000588235 334 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AC005691.1-201ENST00000624723 401 ntBASIC9.13□□□□□ -0.95
LMO3Q8TAP4 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 SP110-215ENST00000540870 2032 ntTSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LMO3Q8TAP4 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
LMO3Q8TAP4 SOX5-203ENST00000396007 1379 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LMO3Q8TAP4 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LMO3Q8TAP4 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms