Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC008481.2-201ENST00000483614 531 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 PGAM1P9-201ENST00000503887 755 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC026704.1-201ENST00000506435 770 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC097522.1-201ENST00000507811 1042 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC108073.1-201ENST00000508231 674 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC073648.1-201ENST00000508957 930 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 OR7E85P-201ENST00000512164 985 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 HNRNPA1P38-201ENST00000523612 957 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC093249.3-201ENST00000562444 424 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC105339.4-201ENST00000624471 737 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 FLII-230ENST00000628188 156 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AL158175.1-203ENST00000635654 1281 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 ZNF826P-204ENST00000597334 1446 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 KANSL2-201ENST00000420613 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 PLCE1-AS1-201ENST00000425267 1370 ntTSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 ENSA-209ENST00000369016 923 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 CST9LP1-201ENST00000376987 444 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AL358781.2-201ENST00000415423 473 ntTSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC104455.1-201ENST00000417340 736 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 HNRNPA1P43-201ENST00000452680 910 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 DAP3P2-201ENST00000458547 510 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 RPS12P20-201ENST00000464109 380 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 KLF7P1-201ENST00000490941 1048 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 NREP-219ENST00000509979 771 ntTSL 4 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC098827.1-201ENST00000514630 667 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 ATP6V1G1P2-201ENST00000522436 346 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AP002469.1-201ENST00000526011 1043 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 PRR13P2-201ENST00000533804 406 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 OR7E159P-201ENST00000553761 298 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 NUTF2P6-201ENST00000560892 385 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 FRG2JP-201ENST00000568299 832 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AL035071.1-201ENST00000569087 2131 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC233702.4-201ENST00000581610 304 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 RNF157-207ENST00000592271 755 ntTSL 2 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC015911.8-201ENST00000592517 560 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 AC034198.2-201ENST00000606447 510 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 LINC01739-204ENST00000641712 1005 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 MAPK10-325ENST00000641537 2623 ntBASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPIPA3F8WFD2 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms