Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC9.3□□□□□ -0.92
MTHFRP42898 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 RPL36P2-201ENST00000426026 315 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AC068137.1-201ENST00000429272 584 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 CFL1P8-201ENST00000436148 475 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 SFTPA3P-201ENST00000446429 367 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 DAZAP2P1-201ENST00000475212 503 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
MTHFRP42898 AC097522.1-201ENST00000507811 1042 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC9.3□□□□□ -0.92
MTHFRP42898 HEXB-205ENST00000509579 806 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC9.3□□□□□ -0.92
MTHFRP42898 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC9.3□□□□□ -0.92
MTHFRP42898 AC007751.2-201ENST00000534173 291 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC9.3□□□□□ -0.92
MTHFRP42898 AL807752.5-201ENST00000569497 820 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AC233702.4-201ENST00000581610 304 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AF186192.2-204ENST00000581667 524 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 MIR4314-201ENST00000583321 92 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AC104794.4-201ENST00000607181 446 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 REST-205ENST00000611211 1103 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 AC018926.2-201ENST00000611214 498 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 EGF-206ENST00000509793 4489 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 NCAPD2P1-201ENST00000432906 1801 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 AC100756.3-201ENST00000618455 1816 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 NVL-202ENST00000340871 2431 ntTSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 CSF2RA-203ENST00000381500 1283 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 MT-TS1-201ENST00000387416 69 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 RFKP1-201ENST00000400940 428 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC9.29□□□□□ -0.92
MTHFRP42898 AC024082.1-201ENST00000435250 699 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 AC007790.1-201ENST00000439081 782 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC9.29□□□□□ -0.92
MTHFRP42898 PRDX2P4-201ENST00000447134 600 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 RN7SL395P-201ENST00000462960 291 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 AC027338.2-201ENST00000504382 526 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC9.29□□□□□ -0.92
MTHFRP42898 SRP68P1-201ENST00000584247 269 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC9.29□□□□□ -0.92
MTHFRP42898 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 RBM22P4-201ENST00000613117 1240 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 AC009093.6-201ENST00000622268 553 ntBASIC9.29□□□□□ -0.92
MTHFRP42898 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 NR3C2-208ENST00000512865 3822 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC9.29□□□□□ -0.92
MTHFRP42898 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC9.29□□□□□ -0.92
MTHFRP42898 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms