Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 AC010536.3-201ENST00000620306 533 ntBASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 AL391422.3-201ENST00000603791 2761 ntBASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CYP46A1Q9Y6A2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CYP46A1Q9Y6A2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 TERF1P5-201ENST00000477545 1207 ntBASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CYP46A1Q9Y6A2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 KRT18P5-201ENST00000436075 1291 ntBASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CYP46A1Q9Y6A2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 AC026271.2-201ENST00000428091 497 ntBASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.18■■□□□ 1.46
CYP46A1Q9Y6A2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 KRT18P11-201ENST00000435214 1283 ntBASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 AC137761.2-201ENST00000561729 223 ntBASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 AC145350.3-201ENST00000569033 163 ntBASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.17■■□□□ 1.46
CYP46A1Q9Y6A2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms